• using R version 4.6.0 (2026-04-24)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-1) 16.1.0     GNU Fortran (Debian 16.1.0-1) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-06-20 18:33:01 UTC
• checking for file ‘rplec/DESCRIPTION’ ... OK
• this is package ‘rplec’ version ‘0.1.3’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘rplec’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the package can be unloaded cleanly ... [2s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
• checking loading without being on the library search path ... [2s/2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [11s/14s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [2s/2s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [12s/16s] OK Examples with CPU (user + system) or elapsed time > 5s                            user system elapsed download_beta_values_case 3.929 0.144 6.153
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [25s/149s] ERROR   Running ‘testthat.R’ [25s/149s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > # This file is part of the standard setup for testthat.   > # It is recommended that you do not modify it.   > #   > # Where should you do additional test configuration?   > # Learn more about the roles of various files in:   > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview   > # * https://testthat.r-lib.org/articles/special-files.html   >   > library(testthat)   > library(rplec)   >   > test_check("rplec")   trying URL 'https://raw.githubusercontent.com/herdiantrisufriyana/rplec/master/data/beta_values_case.rda'   Content type 'application/octet-stream' length 18750575 bytes (17.9 MB)   ===========   downloaded 4.0 MB      Saving _problems/test-bmiq_norm_450k-9.R   trying URL 'https://raw.githubusercontent.com/herdiantrisufriyana/rplec/master/data/beta_values_case.rda'   Content type 'application/octet-stream' length 18750575 bytes (17.9 MB)   ==========   downloaded 3.9 MB      Saving _problems/test-plec-5.R   trying URL 'https://raw.githubusercontent.com/herdiantrisufriyana/rplec/master/data/beta_values_case.rda'   Content type 'application/octet-stream' length 18750575 bytes (17.9 MB)   ==================================================   downloaded 17.9 MB      [ FAIL 2 | WARN 4 | SKIP 0 | PASS 23 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-bmiq_norm_450k.R:9:3'): bmiq_norm_450k validates inputs correctly ──   Error in `utils::download.file(url, temp, mode = "wb")`: download from 'https://raw.githubusercontent.com/herdiantrisufriyana/rplec/master/data/beta_values_case.rda' failed   Backtrace:       ▆    1. └─rplec::download_beta_values_case() at test-bmiq_norm_450k.R:9:3    2. └─utils::download.file(url, temp, mode = "wb")   ── Error ('test-plec.R:5:3'): plec validates inputs correctly ──────────────────   Error in `utils::download.file(url, temp, mode = "wb")`: download from 'https://raw.githubusercontent.com/herdiantrisufriyana/rplec/master/data/beta_values_case.rda' failed   Backtrace:       ▆    1. └─rplec::download_beta_values_case() at test-plec.R:5:3    2. └─utils::download.file(url, temp, mode = "wb")      [ FAIL 2 | WARN 4 | SKIP 0 | PASS 23 ]   Error:   ! Test failures.   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [3s/63s] ERROR Error(s) in re-building vignettes:   ... --- re-building ‘placental_aging_analysis.Rmd’ using rmarkdown trying URL 'https://raw.githubusercontent.com/herdiantrisufriyana/rplec/master/data/beta_values_case.rda' Content type 'application/octet-stream' length 18750575 bytes (17.9 MB) ========== downloaded 3.8 MB Quitting from placental_aging_analysis.Rmd:34-39 [Load our example data] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `utils::download.file()`: ! download from 'https://raw.githubusercontent.com/herdiantrisufriyana/rplec/master/data/beta_values_case.rda' failed --- Backtrace:     ▆  1. └─rplec::download_beta_values_case()  2. └─utils::download.file(url, temp, mode = "wb") ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'placental_aging_analysis.Rmd' failed with diagnostics: download from 'https://raw.githubusercontent.com/herdiantrisufriyana/rplec/master/data/beta_values_case.rda' failed --- failed re-building ‘placental_aging_analysis.Rmd’ SUMMARY: processing the following file failed:   ‘placental_aging_analysis.Rmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [5s/8s] OK
• checking HTML version of manual ... [1s/2s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 2 ERRORs