* installing to library ‘/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages’ * installing *source* package ‘rgph’ ... ** this is package ‘rgph’ version ‘0.1.0’ ** package ‘rgph’ successfully unpacked and MD5 sums checked ** using staged installation ==> Compiling Java sources for ReebGraphPairing ./configure: 17: R_HOME: not found ./configure: 18: R_HOME: not found Using JAVAC: /usr/bin/javac Classpath: inst/java/classes:inst/java/lib/JOCL-0.1.9.jar Note: java/src/usf/saav/topology/merge/PAugmentedMergeTree.java uses or overrides a deprecated API. Note: Recompile with -Xlint:deprecation for details. ==> Java build complete -> inst/java/ReebGraphPairing.jar ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rgph)