Install log for 'redatam'

* installing to library ‘/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages’
* installing *source* package ‘redatam’ ...
** this is package ‘redatam’ version ‘2.2.0’
** package ‘redatam’ successfully unpacked and MD5 sums checked
** using staged installation
Please specify at least one package name on the command line.
Please specify at least one package name on the command line.
** libs
using C++ compiler: ‘g++-16 (Debian 16-20260425-1) 16.0.1 20260425 (prerelease) [gcc-16 r16-8812-gd9c07462a22]’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpKXPtix/R.INSTALL28d18f4c63583/redatam/src'
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/database -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -Iredatamlib/utils -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/cpp4r/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c vendor/pugixml.cpp -o vendor/pugixml.o
vendor/pugixml.cpp: In member function ‘void pugi::xml_document::_move(pugi::xml_document&)’:
vendor/pugixml.cpp:468:66: warning: ‘*other.pugi::impl::{anonymous}::xml_document_struct::pugi::xml_node_struct.pugi::xml_node_struct::header’ is used uninitialized [-Wuninitialized]
  468 |         #define PUGI_IMPL_GETPAGE(n) PUGI_IMPL_GETPAGE_IMPL((n)->header)
      |                                                             ~~~~~^~~~~~
vendor/pugixml.cpp:465:169: note: in definition of macro ‘PUGI_IMPL_GETPAGE_IMPL’
  465 |         #define PUGI_IMPL_GETPAGE_IMPL(header) static_cast<impl::xml_memory_page*>(const_cast<void*>(static_cast<const void*>(reinterpret_cast<const char*>(&header) - (header >> 8))))
      |                                                                                                                                                                         ^~~~~~
vendor/pugixml.cpp:7365:55: note: in expansion of macro ‘PUGI_IMPL_GETPAGE’
 7365 |                 new (other) impl::xml_document_struct(PUGI_IMPL_GETPAGE(other));
      |                                                       ^~~~~~~~~~~~~~~~~
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/database -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -Iredatamlib/utils -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/cpp4r/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c redatamlib/readers/BitArrayReader.cpp -o redatamlib/readers/BitArrayReader.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/database -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -Iredatamlib/utils -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/cpp4r/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c redatamlib/readers/ByteArrayReader.cpp -o redatamlib/readers/ByteArrayReader.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/database -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -Iredatamlib/utils -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/cpp4r/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c redatamlib/entities/Entity.cpp -o redatamlib/entities/Entity.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/database -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -Iredatamlib/utils -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/cpp4r/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c redatamlib/readers/FuzzyEntityParser.cpp -o redatamlib/readers/FuzzyEntityParser.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/database -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -Iredatamlib/utils -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/cpp4r/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c redatamlib/readers/FuzzyVariableParser.cpp -o redatamlib/readers/FuzzyVariableParser.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/database -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -Iredatamlib/utils -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/cpp4r/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c redatamlib/exporters/ParentIDCalculator.cpp -o redatamlib/exporters/ParentIDCalculator.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/database -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -Iredatamlib/utils -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/cpp4r/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c redatamlib/exporters/RListExporter.cpp -o redatamlib/exporters/RListExporter.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/database -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -Iredatamlib/utils -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/cpp4r/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c redatamlib/entities/Variable.cpp -o redatamlib/entities/Variable.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/database -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -Iredatamlib/utils -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/cpp4r/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c redatamlib/readers/XMLParser.cpp -o redatamlib/readers/XMLParser.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/database -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -Iredatamlib/utils -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/cpp4r/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c redatamlib/utils/utils.cpp -o redatamlib/utils/utils.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/database -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -Iredatamlib/utils -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/cpp4r/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c redatamlib/database/RedatamDatabase.cpp -o redatamlib/database/RedatamDatabase.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/database -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -Iredatamlib/utils -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/cpp4r/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c main.cpp -o main.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/database -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -Iredatamlib/utils -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/cpp4r/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c cpp4r.cpp -o cpp4r.o
g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -Wl,-O1 -o redatam.so vendor/pugixml.o redatamlib/readers/BitArrayReader.o redatamlib/readers/ByteArrayReader.o redatamlib/entities/Entity.o redatamlib/readers/FuzzyEntityParser.o redatamlib/readers/FuzzyVariableParser.o redatamlib/exporters/ParentIDCalculator.o redatamlib/exporters/RListExporter.o redatamlib/entities/Variable.o redatamlib/readers/XMLParser.o redatamlib/utils/utils.o redatamlib/database/RedatamDatabase.o main.o cpp4r.o -Lvendor -Lredatamlib -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpKXPtix/R.INSTALL28d18f4c63583/redatam/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpKXPtix/R.INSTALL28d18f4c63583/redatam/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpKXPtix/R.INSTALL28d18f4c63583/redatam/src'
installing to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/00LOCK-redatam/00new/redatam/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (redatam)