* installing to library ‘/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages’ * installing *source* package ‘rEDM’ ... ** package ‘rEDM’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’ using C++17 make[1]: Entering directory '/tmp/Rtmp6NDmdH/R.INSTALL1010ea6cbfac7e/rEDM/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I ./cppEDM/src/ -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c CCM.cpp -o CCM.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I ./cppEDM/src/ -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ComputeError.cpp -o ComputeError.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I ./cppEDM/src/ -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DataFrame.cpp -o DataFrame.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I ./cppEDM/src/ -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Embed.cpp -o Embed.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I ./cppEDM/src/ -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c EmbedDim.cpp -o EmbedDim.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I ./cppEDM/src/ -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Multiview.cpp -o Multiview.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I ./cppEDM/src/ -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ParameterList.cpp -o ParameterList.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I ./cppEDM/src/ -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PredictInterval.cpp -o PredictInterval.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I ./cppEDM/src/ -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PredictNL.cpp -o PredictNL.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I ./cppEDM/src/ -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppEDMCommon.cpp -o RcppEDMCommon.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I ./cppEDM/src/ -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I ./cppEDM/src/ -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c SMap.cpp -o SMap.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I ./cppEDM/src/ -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Simplex.cpp -o Simplex.o make[2]: Entering directory '/tmp/Rtmp6NDmdH/R.INSTALL1010ea6cbfac7e/rEDM/src/cppEDM/src' rm -f API.o CCM.o Common.o DateTime.o EDM.o EDM_Formatting.o EDM_Neighbors.o Eval.o Multiview.o Parameter.o Simplex.o SMap.o libEDM.a make[2]: Leaving directory '/tmp/Rtmp6NDmdH/R.INSTALL1010ea6cbfac7e/rEDM/src/cppEDM/src' make[2]: Entering directory '/tmp/Rtmp6NDmdH/R.INSTALL1010ea6cbfac7e/rEDM/src/cppEDM/src' g++-13 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -fpic -DCCM_THREADED -DUSING_R -c API.cc g++-13 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -fpic -DCCM_THREADED -DUSING_R -c CCM.cc g++-13 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -fpic -DCCM_THREADED -DUSING_R -c Common.cc g++-13 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -fpic -DCCM_THREADED -DUSING_R -c DateTime.cc g++-13 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -fpic -DCCM_THREADED -DUSING_R -c EDM.cc g++-13 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -fpic -DCCM_THREADED -DUSING_R -c EDM_Formatting.cc g++-13 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -fpic -DCCM_THREADED -DUSING_R -c EDM_Neighbors.cc g++-13 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -fpic -DCCM_THREADED -DUSING_R -c Eval.cc g++-13 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -fpic -DCCM_THREADED -DUSING_R -c Multiview.cc g++-13 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -fpic -DCCM_THREADED -DUSING_R -c Parameter.cc g++-13 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -fpic -DCCM_THREADED -DUSING_R -c Simplex.cc g++-13 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native -fpic -DCCM_THREADED -DUSING_R -c SMap.cc ar -rcs libEDM.a API.o CCM.o Common.o DateTime.o EDM.o EDM_Formatting.o EDM_Neighbors.o Eval.o Multiview.o Parameter.o Simplex.o SMap.o # AR passed from Makevars cp libEDM.a ../lib/ make[2]: Leaving directory '/tmp/Rtmp6NDmdH/R.INSTALL1010ea6cbfac7e/rEDM/src/cppEDM/src' g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -Wl,-O1 -o rEDM.so CCM.o ComputeError.o DataFrame.o Embed.o EmbedDim.o Multiview.o ParameterList.o PredictInterval.o PredictNL.o RcppEDMCommon.o RcppExports.o SMap.o Simplex.o -L ./cppEDM/lib/ -lEDM -llapack -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lR make[1]: Leaving directory '/tmp/Rtmp6NDmdH/R.INSTALL1010ea6cbfac7e/rEDM/src' make[1]: Entering directory '/tmp/Rtmp6NDmdH/R.INSTALL1010ea6cbfac7e/rEDM/src' make[1]: Leaving directory '/tmp/Rtmp6NDmdH/R.INSTALL1010ea6cbfac7e/rEDM/src' installing to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/00LOCK-rEDM/00new/rEDM/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rEDM)