- using R version 4.0.3 (2020-10-10)
- using platform: x86_64-pc-linux-gnu (64-bit)
- using session charset: UTF-8
- checking for file ‘np/DESCRIPTION’ ... OK
- this is package ‘np’ version ‘0.60-10’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
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- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘np’ can be installed ... OK
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
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- checking foreign function calls ... OK
- checking R code for possible problems ... [73s/81s] OK
- checking Rd files ... OK
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- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in shell scripts ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [4s/4s] OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking re-building of vignette outputs ... [275s/300s] WARNING
Error(s) in re-building vignettes:
...
--- re-building ‘entropy_np.Rnw’ using Sweave
Nonparametric Kernel Methods for Mixed Datatypes (version 0.60-10)
[vignette("np_faq",package="np") provides answers to frequently asked questions]
[vignette("np",package="np") an overview]
[vignette("entropy_np",package="np") an overview of entropy-based methods]
Error: processing vignette 'entropy_np.Rnw' failed with diagnostics:
Running ‘texi2dvi’ on ‘entropy_np.tex’ failed.
LaTeX errors:
! Undefined control sequence.
<recently read> \Hy@colorlink
l.57 \begin{document}
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink
\Hy@VerboseLinkStop \pdfendlink
l.57 \begin{document}
! Undefined control sequence.
<recently read> \Hy@colorlink
l.57 \begin{document}
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink
\Hy@VerboseLinkStop \pdfendlink
l.57 \begin{document}
! Undefined control sequence.
<recently read> \Hy@colorlink
l.57 \begin{document}
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink
\Hy@VerboseLinkStop \pdfendlink
l.57 \begin{document}
! Undefined control sequence.
<recently read> \Hy@colorlink
l.57 \begin{document}
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink
\Hy@VerboseLinkStop \pdfendlink
l.57 \begin{document}
--- failed re-building ‘entropy_np.Rnw’
--- re-building ‘np.Rnw’ using Sweave
Nonparametric Kernel Methods for Mixed Datatypes (version 0.60-10)
[vignette("np_faq",package="np") provides answers to frequently asked questions]
[vignette("np",package="np") an overview]
[vignette("entropy_np",package="np") an overview of entropy-based methods]
Warning in Ops.factor(dfemale + dmarried + educ + exper + tenure, female) :
‘|’ not meaningful for factors
Error: processing vignette 'np.Rnw' failed with diagnostics:
Running ‘texi2dvi’ on ‘np.tex’ failed.
LaTeX errors:
! Undefined control sequence.
<recently read> \Hy@colorlink
l.77 \begin{document}
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink
\Hy@VerboseLinkStop \pdfendlink
l.77 \begin{document}
! Undefined control sequence.
<recently read> \Hy@colorlink
l.77 \begin{document}
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink
\Hy@VerboseLinkStop \pdfendlink
l.77 \begin{document}
--- failed re-building ‘np.Rnw’
--- re-building ‘np_faq.Rnw’ using Sweave
--- finished re-building ‘np_faq.Rnw’
SUMMARY: processing the following files failed:
‘entropy_np.Rnw’ ‘np.Rnw’
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 WARNING