* installing to library ‘/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages’ * installing *source* package ‘normalblockr’ ... ** this is package ‘normalblockr’ version ‘0.3.0’ ** package ‘normalblockr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs specified C++17 using C++ compiler: ‘g++-16 (Debian 16.2.0-1) 16.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpcybFnx/R.INSTALL26d13a2aadbd3e/normalblockr/src' g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -DARMA_WARN_LEVEL=1 -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -DARMA_WARN_LEVEL=1 -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c exports.cpp -o exports.o In file included from zi_normal_block_var_types.h:4, from exports.cpp:8: zi_normal_block_var_known_clusters.h: In instantiation of ‘ZINormalBlockVarKnownClusters::ZINormalBlockVarKnownClusters(const ZINormalBlockData&, const arma::mat&, const arma::mat&, const arma::vec&, const arma::mat&, double, const arma::mat&) [with NoisePolicy = ZIDiagonalNoise; arma::mat = arma::Mat; arma::vec = arma::Col]’: exports.cpp:196:113: required from here 196 | zi_norm_block_var_cov_diag_noise_known_clusters model(data, C, B0, dm1_0, Omega0, sparsity, sparsity_weights); | ^ zi_normal_block_var_known_clusters.h:77:31: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘const int’ [-Wsign-compare] 77 | for (arma::uword i = 0; i < data.n; ++i) Gamma_.slice(i) = arma::eye(C.n_cols, C.n_cols); | ~~^~~~~~~~ zi_normal_block_var_known_clusters.h: In instantiation of ‘ZINormalBlockVarKnownClusters::ZINormalBlockVarKnownClusters(const ZINormalBlockData&, const arma::mat&, const arma::mat&, const arma::vec&, const arma::mat&, double, const arma::mat&) [with NoisePolicy = ZISphericalNoise; arma::mat = arma::Mat; arma::vec = arma::Col]’: exports.cpp:200:118: required from here 200 | zi_norm_block_var_cov_spherical_noise_known_clusters model(data, C, B0, dm1_0, Omega0, sparsity, sparsity_weights); | ^ zi_normal_block_var_known_clusters.h:77:31: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘const int’ [-Wsign-compare] 77 | for (arma::uword i = 0; i < data.n; ++i) Gamma_.slice(i) = arma::eye(C.n_cols, C.n_cols); | ~~^~~~~~~~ zi_normal_block_var_known_clusters.h: In instantiation of ‘double ZINormalBlockVarKnownClusters::objective() const [with NoisePolicy = ZISphericalNoise]’: zi_normal_block_var_known_clusters.h:85:10: required from here 85 | double objective() const override { | ^~~~~~~~~ zi_normal_block_var_known_clusters.h:93:31: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘const int’ [-Wsign-compare] 93 | for (arma::uword i = 0; i < zi_data_.n; ++i) { | ~~^~~~~~~~~~~~ zi_normal_block_var_known_clusters.h: In instantiation of ‘void ZINormalBlockVarKnownClusters::E_step() [with NoisePolicy = ZISphericalNoise]’: zi_normal_block_var_known_clusters.h:34:8: required from here 34 | void E_step() override { | ^~~~~~ zi_normal_block_var_known_clusters.h:47:31: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘const int’ [-Wsign-compare] 47 | for (arma::uword i = 0; i < zi_data_.n; ++i) { | ~~^~~~~~~~~~~~ zi_normal_block_var_known_clusters.h: In instantiation of ‘void ZINormalBlockVarKnownClusters::M_step() [with NoisePolicy = ZISphericalNoise]’: zi_normal_block_var_known_clusters.h:54:8: required from here 54 | void M_step() override { | ^~~~~~ zi_normal_block_var_known_clusters.h:61:31: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘const int’ [-Wsign-compare] 61 | for (arma::uword i = 0; i < zi_data_.n; ++i) CgC.row(i) = (C_ * Gamma_.slice(i).diag()).t(); | ~~^~~~~~~~~~~~ zi_normal_block_var_known_clusters.h: In instantiation of ‘double ZINormalBlockVarKnownClusters::objective() const [with NoisePolicy = ZIDiagonalNoise]’: zi_normal_block_var_known_clusters.h:85:10: required from here 85 | double objective() const override { | ^~~~~~~~~ zi_normal_block_var_known_clusters.h:93:31: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘const int’ [-Wsign-compare] 93 | for (arma::uword i = 0; i < zi_data_.n; ++i) { | ~~^~~~~~~~~~~~ zi_normal_block_var_known_clusters.h: In instantiation of ‘void ZINormalBlockVarKnownClusters::E_step() [with NoisePolicy = ZIDiagonalNoise]’: zi_normal_block_var_known_clusters.h:34:8: required from here 34 | void E_step() override { | ^~~~~~ zi_normal_block_var_known_clusters.h:47:31: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘const int’ [-Wsign-compare] 47 | for (arma::uword i = 0; i < zi_data_.n; ++i) { | ~~^~~~~~~~~~~~ zi_normal_block_var_known_clusters.h: In instantiation of ‘void ZINormalBlockVarKnownClusters::M_step() [with NoisePolicy = ZIDiagonalNoise]’: zi_normal_block_var_known_clusters.h:54:8: required from here 54 | void M_step() override { | ^~~~~~ zi_normal_block_var_known_clusters.h:61:31: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘const int’ [-Wsign-compare] 61 | for (arma::uword i = 0; i < zi_data_.n; ++i) CgC.row(i) = (C_ * Gamma_.slice(i).diag()).t(); | ~~^~~~~~~~~~~~ g++-16 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -Wl,-O1 -o normalblockr.so RcppExports.o exports.o -llapack -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lRblas -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpcybFnx/R.INSTALL26d13a2aadbd3e/normalblockr/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpcybFnx/R.INSTALL26d13a2aadbd3e/normalblockr/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpcybFnx/R.INSTALL26d13a2aadbd3e/normalblockr/src' installing to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/00LOCK-normalblockr/00new/normalblockr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (normalblockr)