* using log directory ‘/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/nlmixr2autoinit.Rcheck’ * using R version 4.5.2 (2025-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-14 (Debian 14.3.0-10) 14.3.0 GNU Fortran (Debian 14.3.0-10) 14.3.0 * running under: Debian GNU/Linux forky/sid * using session charset: UTF-8 * checking for file ‘nlmixr2autoinit/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘nlmixr2autoinit’ version ‘1.0.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘nlmixr2autoinit’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-release-linux-x86_64/nlmixr2autoinit-00install.html' for details. * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [3s/5s] OK * checking whether the package can be loaded with stated dependencies ... [3s/3s] OK * checking whether the package can be unloaded cleanly ... [3s/3s] OK * checking whether the namespace can be loaded with stated dependencies ... [3s/3s] OK * checking whether the namespace can be unloaded cleanly ... [3s/3s] OK * checking loading without being on the library search path ... [3s/4s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [25s/34s] OK * checking Rd files ... [1s/1s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [70s/94s] OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed run_graphcal 6.072 0.000 7.854 run_ka_solution 5.945 0.063 7.208 approx.vc 5.495 0.114 8.860 run_single_point_extra 5.597 0.000 7.732 getsigma 5.539 0.000 7.066 run_single_point 5.240 0.034 8.289 run_single_point_base 4.845 0.009 6.647 calculate_cl 4.763 0.014 6.418 * checking PDF version of manual ... [7s/10s] OK * checking HTML version of manual ... [3s/6s] OK * checking for non-standard things in the check directory ... OK * DONE Status: OK