* using log directory ‘/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/ernest.Rcheck’ * using R version 4.6.1 (2026-06-24) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-16 (Debian 16.2.0-1) 16.2.0 GNU Fortran (Debian 16.2.0-1) 16.2.0 * running under: Debian GNU/Linux forky/sid * using session charset: UTF-8 * current time: 2026-09-12 12:23:11 UTC * checking for file ‘ernest/DESCRIPTION’ ... OK * this is package ‘ernest’ version ‘1.2.5’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘ernest’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-release-linux-x86_64/ernest-00install.html' for details. * used C++ compiler: ‘g++-16 (Debian 16.2.0-1) 16.2.0’ * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [2s/2s] OK * checking whether the package can be loaded with stated dependencies ... [2s/2s] OK * checking whether the package can be unloaded cleanly ... [2s/2s] OK * checking whether the namespace can be loaded with stated dependencies ... [2s/3s] OK * checking whether the namespace can be unloaded cleanly ... [2s/3s] OK * checking loading without being on the library search path ... [2s/3s] OK * checking whether startup messages can be suppressed ... [2s/2s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [14s/21s] OK * checking Rd files ... [1s/1s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [2s/2s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [15s/20s] OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed plot-ernest 6.074 0.151 9.193 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [356s/192s] ERROR Running ‘testthat.R’ [355s/192s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(ernest) > > test_check("ernest") Starting 2 test processes. Saving _problems/test-generate-135.R [ FAIL 1 | WARN 0 | SKIP 37 | PASS 404 ] ══ Skipped tests (37) ══════════════════════════════════════════════════════════ • On CRAN (37): 'test-plot.R:1:1', 'test-plot.R:48:3', 'test-plot.R:70:3', 'test-calculate.R:41:3', 'test-calculate.R:71:3', 'test-calculate.R:82:3', 'test-cpp11.R:66:3', 'test-cpp11.R:87:3', 'test-likelihood-class.R:43:3', 'test-likelihood-class.R:53:3', 'test-likelihood-class.R:94:1', 'test-prior-class.R:26:3', 'test-prior-class.R:37:3', 'test-prior-class.R:159:1', 'test-multi_ellipsoid.R:6:1', 'test-multi_ellipsoid.R:31:3', 'test-run-class.R:14:1', 'test-run-class.R:39:3', 'test-run-class.R:59:3', 'test-rcrd-class.R:1:1', 'test-sampler-class.R:3:1', 'test-sampler-class.R:115:1', 'test-sampler-class.R:127:1', 'test-sampler-class.R:139:1', 'test-sampler-class.R:157:1', 'test-slice_rectangle.R:6:1', 'test-slice_rectangle.R:16:3', 'test-slice_rectangle.R:27:3', 'test-rwmh_cube.R:6:1', 'test-rwmh_cube.R:27:3', 'test-unif_ellipsoid.R:4:1', 'test-unif_ellipsoid.R:33:3', 'test-utils.R:1:1', 'test-utils.R:14:1', 'test-visualize.R:21:1', 'test-unif_cube.R:4:1', 'test-unif_cube.R:21:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-generate.R:131:3'): `seed` is preserved across runs when set to NA ── Log-evidence falls outside expectation (-6.679) Run Estimate: -13.374 (ERR: 2.140) Backtrace: ▆ 1. └─ernest:::expect_gaussian_run(...) at test-generate.R:131:3 2. └─ernest:::expect_run(...) at ./helper_algorithm-tests.R:137:3 [ FAIL 1 | WARN 0 | SKIP 37 | PASS 404 ] Deleting unused snapshots: 'plot/estimate-1-draw.svg', 'plot/estimate-500-draws-no-evidence.svg', 'plot/estimate-500-draws.svg', 'plot/example-run-no-evidence.svg', 'plot/example-run.svg', 'visualize/trace-basic.svg', 'visualize/trace-x.svg', 'visualize/trace-yz.svg', 'visualize/visualize-basic.svg', 'visualize/visualize-x.svg', and 'visualize/visualize-yz.svg' Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [197s/275s] OK * checking PDF version of manual ... [5s/6s] OK * checking HTML version of manual ... [3s/5s] OK * checking for non-standard things in the check directory ... OK * DONE Status: 1 ERROR