• using R version 4.6.1 (2026-06-24)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 09:53:26 UTC
• checking for file ‘cataScience/DESCRIPTION’ ... OK
• this is package ‘cataScience’ version ‘2.1.2’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘cataScience’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [3s/5s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... [0s/1s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [144s/163s] ERROR   Running ‘testthat.R’ [143s/163s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(cataScience)   >   > test_check("cataScience")      Attaching package: 'dplyr'      The following objects are masked from 'package:stats':          filter, lag      The following objects are masked from 'package:base':          intersect, setdiff, setequal, union         Attaching package: 'readr'      The following objects are masked from 'package:testthat':          edition_get, local_edition         Attaching package: 'bslib'      The following object is masked from 'package:utils':          page         Attaching package: 'DT'      The following objects are masked from 'package:shiny':          dataTableOutput, renderDataTable         Attaching package: 'plotly'      The following object is masked from 'package:ggplot2':          last_plot      The following object is masked from 'package:stats':          filter      The following object is masked from 'package:graphics':          layout         Attaching package: 'rio'      The following object is masked from 'package:plotly':          export         Attaching package: 'naniar'      The following object is masked from 'package:skimr':          n_complete      [ FAIL 2 | WARN 2 | SKIP 0 | PASS 380 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-app-builds.R:10:3'): app.R builds a shiny app object ───────────   Error in `file(con, "w")`: cannot open the connection   Backtrace:        ▆     1. └─base::source("app.R", local = env) at test-app-builds.R:10:3     2. ├─base::withVisible(eval(ei, envir))     3. └─base::eval(ei, envir)     4. └─base::eval(ei, envir)     5. ├─base::source("R/app-ui.R", local = TRUE)     6. │ ├─base::withVisible(eval(ei, envir))     7. │ └─base::eval(ei, envir)     8. │ └─base::eval(ei, envir)     9. ├─bslib::navset_card_tab(...)    10. │ └─bslib:::navset_card(...)    11. │ └─bslib:::collect_nav_items(..., wrapper = wrapper)    12. │ └─rlang::list2(...)    13. ├─bslib::nav_panel("Background", md_page("background-import.md"))    14. │ └─bslib:::tabPanel_(title, ..., value = value, icon = icon)    15. │ └─htmltools::div(...)    16. │ └─rlang::dots_list(...)    17. └─md_page("background-import.md")    18. ├─htmltools::div(...)    19. │ └─rlang::dots_list(...)    20. └─htmltools::includeMarkdown(file.path("markdown", file))    21. └─markdown::mark(path, output = NULL)    22. └─xfun::write_utf8(c("---", yaml, "---", parts$body), file)    23. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)    24. └─base::file(con, "w")   ── Error ('test-app-builds.R:20:3'): the whole UI renders to HTML ──────────────   Error in `file(con, "w")`: cannot open the connection   Backtrace:        ▆     1. └─base::source("app.R", local = env) at test-app-builds.R:20:3     2. ├─base::withVisible(eval(ei, envir))     3. └─base::eval(ei, envir)     4. └─base::eval(ei, envir)     5. ├─base::source("R/app-ui.R", local = TRUE)     6. │ ├─base::withVisible(eval(ei, envir))     7. │ └─base::eval(ei, envir)     8. │ └─base::eval(ei, envir)     9. ├─bslib::navset_card_tab(...)    10. │ └─bslib:::navset_card(...)    11. │ └─bslib:::collect_nav_items(..., wrapper = wrapper)    12. │ └─rlang::list2(...)    13. ├─bslib::nav_panel("Background", md_page("background-import.md"))    14. │ └─bslib:::tabPanel_(title, ..., value = value, icon = icon)    15. │ └─htmltools::div(...)    16. │ └─rlang::dots_list(...)    17. └─md_page("background-import.md")    18. ├─htmltools::div(...)    19. │ └─rlang::dots_list(...)    20. └─htmltools::includeMarkdown(file.path("markdown", file))    21. └─markdown::mark(path, output = NULL)    22. └─xfun::write_utf8(c("---", yaml, "---", parts$body), file)    23. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)    24. └─base::file(con, "w")      [ FAIL 2 | WARN 2 | SKIP 0 | PASS 380 ]   Error:   ! Test failures.   Execution halted
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [0s/0s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR