* installing to library ‘/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages’ * installing *source* package ‘RoBMA’ ... ** package ‘RoBMA’ successfully unpacked and MD5 sums checked ** using staged installation checking for pkg-config... /usr/bin/pkg-config configure: Setting compile and link flags according to pkg-config configure: Compile flags are -I/usr/include/JAGS configure: Link flags are -ljags checking for gcc... gcc-14 checking whether the compiler supports GNU C... no checking whether gcc-14 accepts -g... no checking for gcc-14 option to enable C11 features... unsupported checking for gcc-14 option to enable C99 features... unsupported checking for gcc-14 option to enable C89 features... unsupported checking for jags_version in -ljags... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpaaEeps/R.INSTALL38115936ce1a84/RoBMA/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DMN.cc -o distributions/DMN.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DWMN1.cc -o distributions/DWMN1.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DWMN2.cc -o distributions/DWMN2.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DMNv.cc -o distributions/DMNv.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DWMN1v.cc -o distributions/DWMN1v.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DWMN2v.cc -o distributions/DWMN2v.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DWN1.cc -o distributions/DWN1.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DWN2.cc -o distributions/DWN2.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DWT1.cc -o distributions/DWT1.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DWT2.cc -o distributions/DWT2.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DWN.cc -o distributions/DWN.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DWWN1.cc -o distributions/DWWN1.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DWWN2.cc -o distributions/DWWN2.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DWB.cc -o distributions/DWB.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c transformations/z.cc -o transformations/z.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c transformations/r.cc -o transformations/r.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c transformations/d.cc -o transformations/d.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c transformations/logOR.cc -o transformations/logOR.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c functions/wmnorm.cc -o functions/wmnorm.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c functions/mnorm.cc -o functions/mnorm.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c matrix/matrix.cc -o matrix/matrix.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c source/tools.cc -o source/tools.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c source/mnorm.cc -o source/mnorm.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c source/wmnorm.cc -o source/wmnorm.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c source/transformations.cc -o source/transformations.o gcc-14 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RoBMA.cc -o RoBMA.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c testRoBMA.cc -o testRoBMA.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -Wl,-O1 -o RoBMA.so distributions/DMN.o distributions/DWMN1.o distributions/DWMN2.o distributions/DMNv.o distributions/DWMN1v.o distributions/DWMN2v.o distributions/DWN1.o distributions/DWN2.o distributions/DWT1.o distributions/DWT2.o distributions/DWN.o distributions/DWWN1.o distributions/DWWN2.o distributions/DWB.o transformations/z.o transformations/r.o transformations/d.o transformations/logOR.o functions/wmnorm.o functions/mnorm.o matrix/matrix.o source/tools.o source/mnorm.o source/wmnorm.o source/transformations.o init.o RoBMA.o testRoBMA.o -ljags -ljrmath -llapack -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpaaEeps/R.INSTALL38115936ce1a84/RoBMA/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpaaEeps/R.INSTALL38115936ce1a84/RoBMA/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpaaEeps/R.INSTALL38115936ce1a84/RoBMA/src' installing to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/00LOCK-RoBMA/00new/RoBMA/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RoBMA)