- using R version 4.5.2 (2025-10-31)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-14 (Debian 14.3.0-10) 14.3.0
GNU Fortran (Debian 14.3.0-10) 14.3.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
- checking for file ‘PhotoGEA/DESCRIPTION’ ... OK
- this is package ‘PhotoGEA’ version ‘1.4.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘PhotoGEA’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [26s/30s] OK
- checking Rd files ... [2s/3s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [154s/199s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
confidence_intervals_c3_aci 8.125 0.011 10.420
confidence_intervals_c4_aci 8.119 0.016 9.895
fit_c3_aci 7.713 0.193 11.254
fit_c3_variable_j 7.258 0.032 10.601
initial_guess_c3_variable_j 6.108 0.008 8.320
fit_c4_aci 5.875 0.004 7.678
calculate_jmax 5.421 0.012 5.996
calculate_c3_limitations_grassi 4.759 0.018 6.321
plot_c4_aci_fit 4.540 0.016 6.235
plot_c3_aci_fit 4.452 0.008 5.282
initial_guess_c4_aci 4.398 0.008 5.736
initial_guess_c3_aci 4.264 0.012 5.527
fit_c4_aci_hyperbola 4.102 0.012 5.068
process_tdl_cycle_erml 3.891 0.012 5.376
plot_c4_aci_hyperbola_fit 3.777 0.008 5.236
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [196s/245s] OK
Running ‘testthat.R’ [196s/244s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [2s/2s] OK
- checking PDF version of manual ... [18s/27s] OK
- checking HTML version of manual ... [11s/18s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: OK