- using R version 4.6.1 (2026-06-24)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-16 (Debian 16.1.0-2) 16.1.0
GNU Fortran (Debian 16.1.0-2) 16.1.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
* current time: 2026-07-18 06:13:45 UTC
- checking for file ‘PhotoGEA/DESCRIPTION’ ... OK
- this is package ‘PhotoGEA’ version ‘1.4.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘PhotoGEA’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [27s/33s] OK
- checking Rd files ... [2s/3s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [155s/197s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
confidence_intervals_c3_aci 7.945 0.012 10.989
initial_guess_c3_variable_j 7.241 0.012 8.979
fit_c3_variable_j 7.103 0.012 9.693
confidence_intervals_c4_aci 7.043 0.009 9.747
fit_c3_aci 6.935 0.004 8.851
fit_c4_aci 5.541 0.012 6.973
initial_guess_c4_aci 5.515 0.016 6.170
plot_c3_aci_fit 5.204 0.079 6.216
initial_guess_c3_aci 5.263 0.004 5.719
calculate_jmax 5.002 0.012 7.382
calculate_c3_limitations_warren 4.736 0.012 6.486
calculate_c3_limitations_grassi 4.360 0.012 5.665
fit_c4_aci_hyperbola 4.070 0.015 5.327
calculate_leakiness_ubierna 2.852 0.015 5.034
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [191s/236s] OK
Running ‘testthat.R’ [190s/236s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [2s/2s] OK
- checking PDF version of manual ... [17s/26s] OK
- checking HTML version of manual ... [24s/32s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: OK