• using R version 4.6.1 (2026-06-24)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.2.0-3) 16.2.0     GNU Fortran (Debian 16.2.0-3) 16.2.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-10-10 06:10:16 UTC
• checking for file ‘MiscMetabar/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘MiscMetabar’ version ‘0.16.8’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... INFO Packages suggested but not available for checking: 'lefser', 'mia'
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘MiscMetabar’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [8s/11s] OK
• checking whether the package can be loaded with stated dependencies ... [8s/10s] OK
• checking whether the package can be unloaded cleanly ... [8s/12s] OK
• checking whether the namespace can be loaded with stated dependencies ... [8s/12s] OK
• checking whether the namespace can be unloaded cleanly ... [9s/13s] OK
• checking loading without being on the library search path ... [9s/14s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [64s/82s] OK
• checking Rd files ... [2s/2s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [9s/11s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [119s/142s] OK Examples with CPU (user + system) or elapsed time > 5s                          user system elapsed filter_trim 9.304 0.207 10.823 hill_bar_pq 7.534 0.039 9.696 plot_complexity_pq 5.499 0.090 6.784 biplot_pq 5.467 0.017 6.737 subset_taxa_tax_control 4.910 0.130 5.763 umap_pq 4.476 0.013 5.243 SRS_curve_pq 4.045 0.163 5.194
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [188s/111s] OK   Running ‘spelling.R’ [0s/0s]   Running ‘testthat.R’ [187s/111s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [14s/17s] OK
• checking PDF version of manual ... [15s/18s] OK
• checking HTML version of manual ... [18s/28s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: OK