- using R version 4.5.2 (2025-10-31)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-14 (Debian 14.3.0-10) 14.3.0
GNU Fortran (Debian 14.3.0-10) 14.3.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
- checking for file ‘CollapseLevels/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘CollapseLevels’ version ‘0.3.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘CollapseLevels’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [6s/9s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [1s/2s] ERROR
Running examples in ‘CollapseLevels-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: IVCalc
> ### Title: IVCalc
> ### Aliases: IVCalc
>
> ### ** Examples
>
>
> # Load the German_Credit data set supplied with this package
>
> data("German_Credit")
>
> l<-list()
>
> # Call the function as follows
>
> l<-IVCalc(German_Credit,resp="Good_Bad",bins=10)
Error:
! `group_by_()` was deprecated in dplyr 0.7.0 and is now defunct.
ℹ Please use `group_by()` instead.
ℹ See vignette('programming') for more help
Backtrace:
▆
1. ├─CollapseLevels::IVCalc(German_Credit, resp = "Good_Bad", bins = 10)
2. │ └─d %>% dplyr::group_by_(naml) %>% dplyr::summarise(tot = dplyr::n())
3. ├─dplyr::summarise(., tot = dplyr::n())
4. └─dplyr::group_by_(., naml)
5. └─dplyr:::lazy_defunct("group_by")
6. └─lifecycle::deprecate_stop(...)
7. └─lifecycle:::deprecate_stop0(msg)
8. └─rlang::cnd_signal(...)
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [2s/3s] ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘CollapseLevels.Rmd’ using rmarkdown
Quitting from CollapseLevels.Rmd:53-76 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/lifecycle_error_deprecated>
Error:
! `group_by_()` was deprecated in dplyr 0.7.0 and is now defunct.
ℹ Please use `group_by()` instead.
ℹ See vignette('programming') for more help
---
Backtrace:
▆
1. ├─CollapseLevels::levelsCollapser(...)
2. │ └─d %>% dplyr::group_by_(naml) %>% dplyr::summarise(tot = dplyr::n())
3. ├─dplyr::summarise(., tot = dplyr::n())
4. └─dplyr::group_by_(., naml)
5. └─dplyr:::lazy_defunct("group_by")
6. └─lifecycle::deprecate_stop(...)
7. └─lifecycle:::deprecate_stop0(msg)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'CollapseLevels.Rmd' failed with diagnostics:
`group_by_()` was deprecated in dplyr 0.7.0 and is now defunct.
ℹ Please use `group_by()` instead.
ℹ See vignette('programming') for more help
--- failed re-building ‘CollapseLevels.Rmd’
SUMMARY: processing the following file failed:
‘CollapseLevels.Rmd’
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... [4s/7s] OK
- checking HTML version of manual ... [0s/1s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 2 ERRORs