• using R version 4.6.1 (2026-06-24)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.2.0-3) 16.2.0     GNU Fortran (Debian 16.2.0-3) 16.2.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-10-10 03:55:29 UTC
• checking for file ‘CohortIncidence/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘CohortIncidence’ version ‘4.2.0’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘CohortIncidence’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/3s] OK
• checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the package can be unloaded cleanly ... [2s/3s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/3s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
• checking loading without being on the library search path ... [2s/3s] OK
• checking whether startup messages can be suppressed ... [2s/3s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [11s/15s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... NONE
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [9s/13s] ERROR   Running ‘testthat.R’ [8s/12s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(CohortIncidence)   Loading required package: DatabaseConnector   >   > test_check("CohortIncidence")   attempting to download GiBleed   trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'   Content type 'application/zip' length 6861852 bytes (6.5 MB)   ==================================================   downloaded 6.5 MB      attempting to extract and load: /home/hornik/tmp/scratch/Rtmp2aHGxy/GiBleed_5.3.zip to: /home/hornik/tmp/scratch/Rtmp2aHGxy/GiBleed_5.3.sqlite   Saving _problems/test-CohortIncidence-5.R   [ FAIL 1 | WARN 0 | SKIP 0 | PASS 169 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-CohortIncidence.R:5:3'): executeAnalysis() works ───────────────   Error: not an error   Backtrace:        ▆     1. └─Eunomia::getEunomiaConnectionDetails() at test-CohortIncidence.R:5:3     2. └─Eunomia::getDatabaseFile(...)     3. └─Eunomia::extractLoadData(...)     4. └─Eunomia::loadDataFiles(...)     5. ├─DBI::dbExecute(conn = connection, statement = statement)     6. └─DBI::dbExecute(conn = connection, statement = statement)     7. ├─DBI::dbSendStatement(conn, statement, ...)     8. └─DBI::dbSendStatement(conn, statement, ...)     9. ├─DBI::dbSendQuery(conn, statement, ...)    10. └─RSQLite::dbSendQuery(conn, statement, ...)    11. └─RSQLite (local) .local(conn, statement, ...)    12. ├─methods::new(...)    13. │ ├─methods::initialize(value, ...)    14. │ └─methods::initialize(value, ...)    15. └─RSQLite:::result_create(conn@ptr, statement)      [ FAIL 1 | WARN 0 | SKIP 0 | PASS 169 ]   Error:   ! Test failures.   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [11s/16s] OK
• checking PDF version of manual ... [5s/8s] OK
• checking HTML version of manual ... [3s/6s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR