* installing to library ‘/home/ripley/R/Lib32’
* installing *source* package ‘NestedCategBayesImpute’ ...
** package ‘NestedCategBayesImpute’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gmake[1]: Entering directory '/tmp/RtmpHhaiBv/R.INSTALL2ad97b4a3b/NestedCategBayesImpute/src'
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c RcppExports.cpp -o RcppExports.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c SampleMatrix.cpp -o SampleMatrix.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c SampleMising.cpp -o SampleMising.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c SpecialFunctions.cpp -o SpecialFunctions.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c checkconstraints.cpp -o checkconstraints.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c checkconstraints_imp.cpp -o checkconstraints_imp.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c generateData.cpp -o generateData.o
generateData.cpp: In function ‘Rcpp::List GetImpossibleHouseholds(Rcpp::IntegerVector, Rcpp::IntegerVector, Rcpp::List, Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::NumericVector, int, int, int, bool, bool)’:
generateData.cpp:105:18: warning: passing NULL to non-pointer argument 1 of ‘Rcpp::Vector<RTYPE, StoragePolicy>::Vector(const int&) [with int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ [-Wconversion-null]
     List batch = NULL;
                  ^
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c groupcount.cpp -o groupcount.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c sampleG.cpp -o sampleG.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c sampleLambda.cpp -o sampleLambda.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c sampleM.cpp -o sampleM.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c samplePhi.cpp -o samplePhi.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c sampleW.cpp -o sampleW.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c sample_households_imp.cpp -o sample_households_imp.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c samplealpha.cpp -o samplealpha.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c samplehhparallel.cpp -o samplehhparallel.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c samplehouseholds.cpp -o samplehouseholds.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c sampleomega.cpp -o sampleomega.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c samplepi.cpp -o samplepi.o
/opt/csw/bin/g++ -std=gnu++11 -I"/home/ripley/R/gcc/include" -DNDEBUG  -I'/home/ripley/R/Lib32/Rcpp/include' -I'/home/ripley/R/Lib32/RcppParallel/include' -I/opt/csw/include -I/usr/local/include   -fPIC  -O2  -c utils.cpp -o utils.o
/opt/csw/bin/g++ -std=gnu++11 -shared -L/usr/local/lib -L/opt/csw/lib -o NestedCategBayesImpute.so RcppExports.o SampleMatrix.o SampleMising.o SpecialFunctions.o checkconstraints.o checkconstraints_imp.o generateData.o groupcount.o sampleG.o sampleLambda.o sampleM.o samplePhi.o sampleW.o sample_households_imp.o samplealpha.o samplehhparallel.o samplehouseholds.o sampleomega.o samplepi.o utils.o -L/home/ripley/R/Lib32/RcppParallel/lib -ltbb -ltbbmalloc
gmake[1]: Leaving directory '/tmp/RtmpHhaiBv/R.INSTALL2ad97b4a3b/NestedCategBayesImpute/src'
gmake[1]: Entering directory '/tmp/RtmpHhaiBv/R.INSTALL2ad97b4a3b/NestedCategBayesImpute/src'
gmake[1]: Leaving directory '/tmp/RtmpHhaiBv/R.INSTALL2ad97b4a3b/NestedCategBayesImpute/src'
installing to /home/ripley/R/Lib32/00LOCK-NestedCategBayesImpute/00new/NestedCategBayesImpute/libs
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (NestedCategBayesImpute)

real     2:39.7
user     2:17.4
sys        15.8