• using R version 4.0.0 alpha (2020-04-01 r78130)
• using platform: x86_64-apple-darwin17.0 (64-bit)
• using session charset: UTF-8
• checking for file ‘Causata/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘Causata’ version ‘4.2-0’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘Causata’ can be installed ... [11s/16s] OK
• checking installed package size ... OK
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... NOTE
  Malformed Title field: should not end in a period.
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [10s/14s] NOTE
  BinaryCut: no visible global function definition for ‘quantile’
  CleanNaFromContinuousFunction: no visible global function definition
    for ‘median’
  CleanNaFromContinuousFunction: no visible global function definition
    for ‘na.omit’
  GetMetadata.Connect: no visible global function definition for
    ‘dbGetQuery’
  GetRawData.Connect: no visible global function definition for
    ‘dbGetQuery’
  Linearity: no visible global function definition for ‘median’
  PredictivePowerCv: no visible global function definition for ‘sd’
  ReadCausataCsv: no visible global function definition for ‘read.csv’
  ToPmml.GlmnetModelDefinition: no visible global function definition for
    ‘coef’
  ToPmml.GlmnetModelDefinition: no visible global function definition for
    ‘terms.formula’
  ValidateModel: no visible global function definition for ‘predict’
  predict.GlmnetModelDefinition: no visible global function definition
    for ‘model.matrix’
  predict.GlmnetModelDefinition: no visible binding for global variable
    ‘contrasts’
  predict.GlmnetModelDefinition: no visible global function definition
    for ‘predict’
  Undefined global functions or variables:
    coef contrasts dbGetQuery median model.matrix na.omit predict
    quantile read.csv sd terms.formula
  Consider adding
    importFrom("stats", "coef", "contrasts", "median", "model.matrix",
               "na.omit", "predict", "quantile", "sd", "terms.formula")
    importFrom("utils", "read.csv")
  to your NAMESPACE file.
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in Makefiles ... OK
• checking for GNU extensions in Makefiles ... OK
• checking include directives in Makefiles ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [8s/10s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [48s/66s] ERROR
    Running ‘testBinaryCut.R’ [3s/4s]
    Running ‘testBinaryPredictor.R’ [3s/4s]
    Running ‘testCleanNaFromContinuous.R’ [3s/4s]
    Running ‘testCleanNaFromFactor.R’ [3s/4s]
    Running ‘testDiscretize.R’ [3s/4s]
    Running ‘testFocalPointQuery.R’ [3s/3s]
    Running ‘testGetStratifiedSample.R’ [3s/4s]
    Running ‘testMergeLevels.R’ [3s/4s]
    Running ‘testModelDefinition.R’ [3s/4s]
    Running ‘testPredictivePower.R’ [2s/3s]
    Running ‘testPreprocess.R’ [2s/3s]
    Running ‘testQuery.R’ [2s/3s]
    Running ‘testQueryFunctions.R’ [3s/4s]
    Running ‘testReliableModelCreation.R’ [3s/4s]
    Running ‘testReliableVariableCreation.R’ [3s/4s]
    Running ‘testToPmml.R’ [4s/6s]
    Running ‘testTransformationReplay.R’ [3s/3s]
  Running the tests in ‘tests/testTransformationReplay.R’ failed.
  Last 13 lines of output:
    + expect_that(f1, is_equivalent_to(f2))
    +
    + # Now, create a new data.frame and apply the same transformation to it. Any values in the factor we have
    + # that is not "a", or "b" should be replaced with "Other"
    + #
    + new.df <- data.frame(var__AP=c("a", "b", "c", "c", "c", "d", "a", NA))
    + transformed <- transformer(new.df)
    + expect_that(transformed$var__AP, is_equivalent_to(factor(c("a", "b", "Other", "Other", "Other", "Other", "a", NA))))
    + })
    Error: Test failed: 'Applying MergeLevels can be replayed'
    * `x` not equivalent to `expected`.
    Types not compatible: character is not integer
    * `x` not equivalent to `expected`.
    Types not compatible: character is not integer
    Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... [0s/0s] NONE
    ‘Causata-vignette.rnw’... [0s/0s] OK
• checking re-building of vignette outputs ... [41s/57s] OK
• checking PDF version of manual ... OK
• DONE
  Status: 1 ERROR, 2 NOTEs