* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘wrTopDownFrag’ ... ** this is package ‘wrTopDownFrag’ version ‘1.0.4’ ** package ‘wrTopDownFrag’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘wrTopDownFrag’ finding HTML links ... done AAfragSettings html addMassModif html checkModTy html combinatIntTable html combinateAllAndSum html corInDelShift html corMutShift html countChildrenParent html countPotModifAAs html dot-CtermPepCut html dot-NtermPepCut html dot-chColNa html dot-chargeCatchingAA html dot-checkModTy html dot-countLET html dot-countModif html dot-evalIsoFra html dot-exNamesTyDeList html dot-multMatByColNa html dot-parCombinateAllAndSum html dot-prefFragPattern html dot-singleSpecModif html dot-termPepCut html evalIsoFragm html fragmentSeq html identifFixedModif html identifVarModif html identifyPepFragments html makeFragments html modifFragmTabOutput html plotFragmLoc html plotMgfLike html plotNTheor html plotPrefFragPat html randMassByMut html randMassByStochastic html scoreChargeCatch html scoreFragments html scorePrefFrag html scoreProteinFragments html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wrTopDownFrag)