* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘wrTopDownFrag’ ...
** this is package ‘wrTopDownFrag’ version ‘1.0.4’
** package ‘wrTopDownFrag’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘wrTopDownFrag’
    finding HTML links ... done
    AAfragSettings                          html  
    addMassModif                            html  
    checkModTy                              html  
    combinatIntTable                        html  
    combinateAllAndSum                      html  
    corInDelShift                           html  
    corMutShift                             html  
    countChildrenParent                     html  
    countPotModifAAs                        html  
    dot-CtermPepCut                         html  
    dot-NtermPepCut                         html  
    dot-chColNa                             html  
    dot-chargeCatchingAA                    html  
    dot-checkModTy                          html  
    dot-countLET                            html  
    dot-countModif                          html  
    dot-evalIsoFra                          html  
    dot-exNamesTyDeList                     html  
    dot-multMatByColNa                      html  
    dot-parCombinateAllAndSum               html  
    dot-prefFragPattern                     html  
    dot-singleSpecModif                     html  
    dot-termPepCut                          html  
    evalIsoFragm                            html  
    fragmentSeq                             html  
    identifFixedModif                       html  
    identifVarModif                         html  
    identifyPepFragments                    html  
    makeFragments                           html  
    modifFragmTabOutput                     html  
    plotFragmLoc                            html  
    plotMgfLike                             html  
    plotNTheor                              html  
    plotPrefFragPat                         html  
    randMassByMut                           html  
    randMassByStochastic                    html  
    scoreChargeCatch                        html  
    scoreFragments                          html  
    scorePrefFrag                           html  
    scoreProteinFragments                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (wrTopDownFrag)