* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘wrMisc’ ...
** package ‘wrMisc’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘wrMisc’
    finding HTML links ... done
    XYToDiffPpm                             html  
    addBeforFileExtension                   html  
    adjBy2ptReg                             html  
    adjustUnitPrefix                        html  
    appendNR                                html  
    arrayCV                                 html  
    asSepList                               html  
    buildTree                               html  
    cbindNR                                 html  
    checkAvSd                               html  
    checkFilePath                           html  
    checkGrpOrder                           html  
    checkGrpOrderSEM                        html  
    checkSimValueInSer                      html  
    checkStrictOrder                        html  
    checkVectLength                         html  
    cleanReplicates                         html  
    closeMatchMatrix                        html  
    coinPermTest                            html  
    colMedSds                               html  
    colSds                                  html  
    colorAccording2                         html  
    combinatIntTable                        html  
    combineAsN                              html  
    combineByEitherFactor                   html  
    combineOverlapInfo                      html  
    combineRedBasedOnCol                    html  
    combineRedundLinesInList                html  
    combineRedundLinesInListAcRef           html  
    combineReplFromListToMatr               html  
    combineSingleT                          html  
    completeArrLst                          html  
    concatMatch                             html  
    confInt                                 html  
    contribToContigPerFrag                  html  
    conv01toColNa                           html  
    convColorToTransp                       html  
    convMatr2df                             html  
    convToNum                               html  
    coordOfFilt                             html  
    correctToUnique                         html  
    correctWinPath                          html  
    countCloseToLimits                      html  
    countSameStartEnd                       html  
    cutArrayInCluLike                       html  
    cutAtMultSites                          html  
    cutToNgrp                               html  
    diffCombin                              html  
    diffPPM                                 html  
    dot-addLetterWoLast                     html  
    dot-allRatioMatr1to2                    html  
    dot-allRatios                           html  
    dot-arrLstMean                          html  
    dot-arrLstSEM                           html  
    dot-asDF2                               html  
    dot-breakInSer                          html  
    dot-bringToCtr                          html  
    dot-checkArgNa                          html  
    dot-checkConsistentArrList              html  
    dot-checkConvt2Vect                     html  
    dot-checkFactor                         html  
    dot-checkFileNameExtensions             html  
    dot-checkLegendLoc                      html  
    dot-checkLmConfInt                      html  
    dot-checkRegrArguments                  html  
    dot-chooseGrpCol                        html  
    dot-combineListAnnot                    html  
    dot-compareByDiff                       html  
    dot-compareByLogRatio                   html  
    dot-compareByPPM                        html  
    dot-complCols                           html  
    dot-composeCallName                     html  
    dot-convertMatrToNum                    html  
    dot-convertNa                           html  
    dot-corDuplItemsByIncrem                html  
    dot-cutAtSearch                         html  
    dot-cutStr                              html  
    dot-datSlope                            html  
    dot-extrNAneighb                        html  
    dot-extrNumHeadingCap                   html  
    dot-extrNumHeadingSepChar               html  
    dot-filtSize                            html  
    dot-filterNetw                          html  
    dot-filterSw                            html  
    dot-findBorderOverlaps                  html  
    dot-firstMin                            html  
    dot-fuse2ArrBy2ndDim                    html  
    dot-getAmean                            html  
    dot-getAmean2                           html  
    dot-getMvalue2                          html  
    dot-growTree                            html  
    dot-insp1dimByClustering                html  
    dot-inspectHeader                       html  
    dot-keepCenter1d                        html  
    dot-keepFiniteCol                       html  
    dot-mayBeNum                            html  
    dot-medianSpecGrp                       html  
    dot-mergeMatrices                       html  
    dot-minDif                              html  
    dot-neigbDis                            html  
    dot-normConstSlope                      html  
    dot-normalize                           html  
    dot-offCenter                           html  
    dot-pasteCols                           html  
    dot-plotCountPie                        html  
    dot-plusLowerCaps                       html  
    dot-predRes                             html  
    dot-raiseColLowest                      html  
    dot-removeCol                           html  
    dot-removeEmptyCol                      html  
    dot-replSpecChar                        html  
    dot-retain1stPart                       html  
    dot-rowGrpCV                            html  
    dot-rowGrpMeans                         html  
    dot-rowGrpSds                           html  
    dot-rowGrpSums                          html  
    dot-rowNorm                             html  
    dot-rowNormFact                         html  
    dot-scale01                             html  
    dot-scaleSpecGrp                        html  
    dot-scaleXY                             html  
    dot-seqCutStr                           html  
    dot-setLowestTo                         html  
    dot-sortMid                             html  
    dot-stackArray                          html  
    dot-summarizeCols                       html  
    dot-trimFromEnd                         html  
    dot-trimFromStart                       html  
    dot-trimLeft                            html  
    dot-trimRight                           html  
    dot-uniqueWName                         html  
    dot-vector2Matr                         html  
    elimCloseCoord                          html  
    equLenNumber                            html  
    exclExtrValues                          html  
    exponNormalize                          html  
    extr1chan                               html  
    extrColsDeX                             html  
    extrNumericFromMatr                     html  
    extrSpcText                             html  
    extractLast2numericParts                html  
    filt3dimArr                             html  
    filtSizeUniq                            html  
    filterLiColDeList                       html  
    filterList                              html  
    filterNetw                              html  
    findCloseMatch                          html  
    findRepeated                            html  
    findSimilFrom2sets                      html  
    findUsableGroupRange                    html  
    firstLineOfDat                          html  
    firstOfRepLines                         html  
    firstOfRepeated                         html  
    fuseAnnotMatr                           html  
    fuseCommonListElem                      html  
    fusePairs                               html  
    get1stOfRepeatedByCol                   html  
    getValuesByUnique                       html  
    gitDataUrl                              html  
    htmlSpecCharConv                        html  
    keepCommonText                          html  
    levIndex                                html  
    linModelSelect                          html  
    linRegrParamAndPVal                     html  
    listBatchReplace                        html  
    listGroupsByNames                       html  
    lmSelClu                                html  
    lrbind                                  html  
    makeMAList                              html  
    makeNRedMatr                            html  
    matchMatrixLinesToRef                   html  
    matchNamesWithReverseParts              html  
    matchSampToPairw                        html  
    matr2list                               html  
    mergeMatrices                           html  
    mergeMatrixList                         html  
    mergeSelCol                             html  
    mergeSelCol3                            html  
    mergeVectors                            html  
    mergeW2                                 html  
    minDiff                                 html  
    moderTest2grp                           html  
    moderTestXgrp                           html  
    multiCharReplace                        html  
    multiMatch                              html  
    nFragments                              html  
    nFragments0                             html  
    nNonNumChar                             html  
    naOmit                                  html  
    nonAmbiguousMat                         html  
    nonAmbiguousNum                         html  
    nonRedundLines                          html  
    nonredDataFrame                         html  
    normalizeThis                           html  
    numPairDeColNames                       html  
    orderMatrToRef                          html  
    organizeAsListOfRepl                    html  
    pVal2lfdr                               html  
    packageDownloadStat                     html  
    pairsAsPropensMatr                      html  
    partUnlist                              html  
    partialDist                             html  
    pasteC                                  html  
    presenceFilt                            html  
    presenceGrpFilt                         html  
    protectSpecChar                         html  
    randIndFx                               html  
    rankToContigTab                         html  
    ratioAllComb                            html  
    ratioToPpm                              html  
    readCsvBatch                            html  
    readTabulatedBatch                      html  
    readVarColumns                          html  
    readXlsxBatch                           html  
    reduceTable                             html  
    regrBy1or2point                         html  
    regrMultBy1or2point                     html  
    renameColumns                           html  
    reorgByCluNo                            html  
    replNAbyLow                             html  
    replPlateCV                             html  
    replicateStructure                      html  
    rmDupl2colMatr                          html  
    rmEnumeratorName                        html  
    rnormW                                  html  
    rowCVs                                  html  
    rowGrpCV                                html  
    rowGrpMeans                             html  
    rowGrpNA                                html  
    rowGrpSds                               html  
    rowGrpSums                              html  
    rowMedSds                               html  
    rowNormalize                            html  
    rowSEMs                                 html  
    rowSds                                  html  
    sampNoDeMArrayLM                        html  
    scaleXY                                 html  
    searchDataPairs                         html  
    searchLinesAtGivenSlope                 html  
    simpleFragFig                           html  
    singleLineAnova                         html  
    sortBy2CategorAnd1IntCol                html  
    sortByNRepeated                         html  
    stableMode                              html  
    standardW                               html  
    stdErrMedBoot                           html  
    sumNAperGroup                           html  
    summarizeCols                           html  
    sysDate                                 html  
    tTestAllVal                             html  
    tableToPlot                             html  
    test2factLimma                          html  
    transpGraySca                           html  
    treatTxtDuplicates                      html  
    triCoord                                html  
    trimRedundText                          html  
    unifyEnumerator                         html  
    uniqCountReport                         html  
    upperMaCoord                            html  
    withinRefRange                          html  
    writeCsv                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (wrMisc)