- using R version 4.3.0 Patched (2023-05-23 r84465)
- using platform: x86_64-pc-linux-gnu (64-bit)
- R was compiled by
gcc-11 (Debian 11.3.0-12) 11.3.0
GNU Fortran (Debian 11.3.0-12) 11.3.0
- running under: Debian GNU/Linux 12 (bookworm)
- using session charset: UTF-8
- checking for file ‘webSDM/DESCRIPTION’ ... OK
- this is package ‘webSDM’ version ‘1.1-3’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘webSDM’ can be installed ... OK
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [20s/24s] OK
- checking whether the package can be loaded with stated dependencies ... [19s/21s] OK
- checking whether the package can be unloaded cleanly ... [20s/22s] OK
- checking whether the namespace can be loaded with stated dependencies ... [21s/24s] OK
- checking whether the namespace can be unloaded cleanly ... [20s/24s] OK
- checking loading without being on the library search path ... [20s/24s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [87s/101s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/1s] OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [137s/159s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
coef.SDMfit 9.428 0.105 10.340
evaluateModelFit 9.293 0.075 10.991
predict.trophicSDMfit 8.586 0.023 10.154
coef.trophicSDMfit 8.391 0.068 9.908
predict.SDMfit 8.281 0.103 9.467
print.trophicSDMfit 8.326 0.051 9.328
summary.SDMfit 8.269 0.080 9.714
print.SDMfit 8.231 0.072 9.618
summary.trophicSDMfit 8.277 0.007 9.562
trophicSDM 6.592 0.016 7.749
computeVariableImportance 5.100 0.035 6.003
predictFundamental 4.910 0.064 6.127
plotG 4.820 0.131 5.718
plot.trophicSDMfit 4.827 0.067 5.875
plot.SDMfit 4.301 0.039 5.219
loo.trophicSDMfit 4.232 0.012 5.240
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking re-building of vignette outputs ... [6s/9s] OK
- checking PDF version of manual ... [6s/9s] OK
- checking HTML version of manual ... [1s/2s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: OK