* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘vivaldi’ ...
** this is package ‘vivaldi’ version ‘1.0.1’
** package ‘vivaldi’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘vivaldi’
    finding HTML links ... done
    add_metadata                            html  
    af_distribution                         html  
    arrange_data                            html  
    dNdS_segment                            html  
    example_filtered_SNV_df                 html  
    filter_variants                         html  
    merge_replicates                        html  
    plot_shannon                            html  
    position_allele_freq                    html  
    prepare_annotations                     html  
    read_reference_fasta_dna                html  
    shannon_entropy                         html  
    shared_snv_plot                         html  
    shared_snv_table                        html  
    snpeff_info                             html  
    snv_genome                              html  
    snv_location                            html  
    snv_segment                             html  
    tally_it                                html  
    tstv_plot                               html  
    tstv_ratio                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (vivaldi)