* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘topologyR’ ...
** this is package ‘topologyR’ version ‘0.2.0’
** package ‘topologyR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
specified C++17
using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’
using C++17
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjgpRlg/R.INSTALL13ebb85bd3edd6/topologyR/src'
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c alexandrov_engine.cpp -o alexandrov_engine.o
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c topology_engine.cpp -o topology_engine.o
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c visibility_graph.cpp -o visibility_graph.o
g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o topologyR.so RcppExports.o alexandrov_engine.o topology_engine.o visibility_graph.o -fopenmp -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjgpRlg/R.INSTALL13ebb85bd3edd6/topologyR/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjgpRlg/R.INSTALL13ebb85bd3edd6/topologyR/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjgpRlg/R.INSTALL13ebb85bd3edd6/topologyR/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-topologyR/00new/topologyR/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘topologyR’
    finding HTML links ... done
    analyze_topology_factors                html  
    bitopology_invariants                   html  
    calculate_thresholds                    html  
    calculate_topology                      html  
    complete_topology                       html  
    generate_alexandrov_topology            html  
    generate_bitopology                     html  
    generate_topology                       html  
    horizontal_visibility_graph             html  
    is_topology_connected                   html  
    is_topology_connected2                  html  
    is_topology_connected_exact             html  
    is_topology_connected_manual            html  
    natural_visibility_graph                html  
    simplest_topology                       html  
    topologyR-package                       html  
    visualize_topology_thresholds           html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (topologyR)