* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘tidyGenR’ ...
** this is package ‘tidyGenR’ version ‘0.1.7’
** package ‘tidyGenR’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘tidyGenR’
    finding HTML links ... done
    add_allele_no                           html  
    align_matrices                          html  
    amplisas2tidy                           html  
    check1_lowcount                         html  
    check2_unique_snames                    html  
    check3_non_orphan                       html  
    check_raw_reads                         html  
    compare_calls                           html  
    cutadapt_command                        html  
    demultiplex                             html  
    dereplicate                             html  
    dist_m                                  html  
    dist_m_all                              html  
    explore_dada                            html  
    filt_msa                                html  
    filter_variants                         html  
    genotype                                html  
    genotype_conversion                     html  
    genotypes                               html  
    mds_comp                                html  
    out_popart                              html  
    primers                                 html  
    reads_loci_samples                      html  
    reads_track                             html  
    remove_hemizygotes                      html  
    remove_monomorphic                      html  
    remove_poor_fastq                       html  
    rename_alleles                          html  
    rm_n_msa                                html  
    tidy2sequences                          html  
    tidyGenR-package                        html  
    trunc_fr                                html  
    truncate                                html  
    var_seq2len                             html  
    variant_call                            html  
    variant_calling_dada                    html  
    variant_calls                           html  
    variants                                html  
    view_msa                                html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (tidyGenR)