Install log for 'tgp'

* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘tgp’ ...
** package ‘tgp’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmpA02fPN/R.INSTALL31e6635308684/tgp/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c all_draws.c -o all_draws.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c base.cc -o base.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c corr.cc -o corr.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c dopt.c -o dopt.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c exp.cc -o exp.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c exp_sep.cc -o exp_sep.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c gen_covar.c -o gen_covar.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c gp.cc -o gp.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c lh.c -o lh.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c lik_post.c -o lik_post.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c linalg.c -o linalg.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c list.cc -o list.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c matern.cc -o matern.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c matrix.c -o matrix.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c model.cc -o model.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c mr_exp_sep.cc -o mr_exp_sep.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c mstructs.cc -o mstructs.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c params.cc -o params.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c predict.c -o predict.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c predict_linear.c -o predict_linear.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c rand_draws.c -o rand_draws.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c rand_pdf.c -o rand_pdf.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c randomkit.c -o randomkit.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c rhelp.c -o rhelp.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c sim.cc -o sim.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c temper.cc -o temper.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c tgp.cc -o tgp.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c tree.cc -o tree.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c twovar.cc -o twovar.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o tgp.so all_draws.o base.o corr.o dopt.o exp.o exp_sep.o gen_covar.o gp.o init.o lh.o lik_post.o linalg.o list.o matern.o matrix.o model.o mr_exp_sep.o mstructs.o params.o predict.o predict_linear.o rand_draws.o rand_pdf.o randomkit.o rhelp.o sim.o temper.o tgp.o tree.o twovar.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpA02fPN/R.INSTALL31e6635308684/tgp/src'
make[1]: Entering directory '/tmp/RtmpA02fPN/R.INSTALL31e6635308684/tgp/src'
make[1]: Leaving directory '/tmp/RtmpA02fPN/R.INSTALL31e6635308684/tgp/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-tgp/00new/tgp/libs
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘tgp’
    finding HTML links ... done
    btgp                                    html  
    default.itemps                          html  
    dopt.gp                                 html  
    exp2d                                   html  
    exp2d.Z                                 html  
    exp2d.rand                              html  
    friedman.1.data                         html  
    interp.loess                            html  
    itemps                                  html  
    lhs                                     html  
    mapT                                    html  
    optim.tgp                               html  
    partition                               html  
    plot.tgp                                html  
    predict.tgp                             html  
    sens                                    html  
    tgp-internal                            html  
    tgp-package                             html  
    tgp.default.params                      html  
    tgp.design                              html  
    tgp.trees                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (tgp)