* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘tern’ ...
** package ‘tern’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘tern’
finding HTML links ... done
abnormal html
abnormal_by_baseline html
abnormal_by_marked html
abnormal_by_worst_grade html
abnormal_by_worst_grade_worsen html
add_riskdiff html
add_rowcounts html
aesi_label html
afun_riskdiff html
afun_selected_stats html
analyze_colvars_functions html
analyze_functions html
analyze_variables html
analyze_vars_in_cols html
append_varlabels html
apply_auto_formatting html
argument_convention html
arrange_grobs html
as.rtable html
as_factor_keep_attributes html
assertions html
bins_percent_labels html
bland_altman html
c_label_n html
c_label_n_alt html
cfun_by_flag html
check_diff_prop_ci html
check_same_n html
combination_function html
combine_counts html
combine_groups html
combine_levels html
combine_vectors html
compare_variables html
control_analyze_vars html
control_annot html
control_coxph html
control_coxreg html
control_incidence_rate html
control_lineplot_vars html
control_logistic html
control_step html
control_surv_time html
control_surv_timepoint html
count_cumulative html
count_missed_doses html
count_occurrences html
count_occurrences_by_grade html
count_patients_events_in_cols html
count_patients_with_event html
count_patients_with_flags html
count_values_funs html
cox_regression html
cox_regression_inter html
cut_quantile_bins html
d_count_abnormal_by_baseline html
d_count_cumulative html
d_count_missed_doses html
d_onco_rsp_label html
d_pkparam html
d_proportion html
d_proportion_diff html
d_rsp_subgroups_colvars html
d_survival_subgroups_colvars html
d_test_proportion_diff html
day2month html
decorate_grob html
decorate_grob_factory html
decorate_grob_set html
default_na_str html
default_stats_formats_labels html
desctools_binom html
df2gg html
df_explicit_na html
dot-is_equal_float html
draw_grob html
empty_vector_if_na html
estimate_coef html
estimate_multinomial_rsp html
estimate_proportions html
ex_data html
explicit_na html
extract_by_name html
extract_rsp_biomarkers html
extract_rsp_subgroups html
extract_survival_biomarkers html
extract_survival_subgroups html
extreme_format html
f_conf_level html
f_pval html
fct_collapse_only html
fct_discard html
fct_explicit_na_if html
fit_coxreg html
fit_logistic html
fit_rsp_step html
fit_survival_step html
forest_viewport html
format_auto html
format_count_fraction html
format_count_fraction_fixed_dp html
format_count_fraction_lt10 html
format_extreme_values html
format_extreme_values_ci html
format_fraction html
format_fraction_fixed_dp html
format_fraction_threshold html
format_sigfig html
format_xx html
formatting_functions html
g_forest html
g_ipp html
g_km html
g_lineplot html
g_step html
g_waterfall html
get_covariates html
get_smooths html
groups_list_to_df html
h_adlb_abnormal_by_worst_grade html
h_adlb_worsen html
h_adsl_adlb_merge_using_worst_flag html
h_ancova html
h_append_grade_groups html
h_col_indices html
h_count_cumulative html
h_cox_regression html
h_data_plot html
h_decompose_gg html
h_format_row html
h_g_ipp html
h_ggkm html
h_glm_count html
h_grob_coxph html
h_grob_median_surv html
h_grob_tbl_at_risk html
h_grob_y_annot html
h_incidence_rate html
h_km_layout html
h_logistic_regression html
h_map_for_count_abnormal html
h_odds_ratio html
h_pkparam_sort html
h_prop_diff html
h_prop_diff_test html
h_proportions html
h_response_biomarkers_subgroups html
h_response_subgroups html
h_split_by_subgroups html
h_split_param html
h_stack_by_baskets html
h_step html
h_survival_biomarkers_subgroups html
h_survival_duration_subgroups html
h_tab_one_biomarker html
h_tbl_coxph_pairwise html
h_tbl_median_surv html
h_worsen_counter html
h_xticks html
imputation_rule html
incidence_rate html
labels_or_names html
labels_use_control html
logistic_regression_cols html
logistic_summary_by_flag html
make_names html
month2day html
muffled_car_anova html
n_available html
odds_ratio html
prop_diff html
prop_diff_test html
prune_occurrences html
range_noinf html
reapply_varlabels html
response_biomarkers_subgroups html
response_subgroups html
rtable2gg html
rtables_access html
s_cox_multivariate html
sas_na html
score_occurrences html
split_cols_by_groups html
split_text_grob html
stack_grobs html
stat_mean_ci html
stat_mean_pval html
stat_median_ci html
stat_propdiff_ci html
strata_normal_quantile html
study_arm html
summarize_ancova html
summarize_change html
summarize_colvars html
summarize_functions html
summarize_glm_count html
summarize_logistic html
summarize_num_patients html
summarize_patients_exposure_in_cols html
survival_biomarkers_subgroups html
survival_coxph_pairwise html
survival_duration_subgroups html
survival_time html
survival_timepoint html
tern-package html
tidy.glm html
tidy.step html
tidy_coxreg html
finding level-2 HTML links ... done
to_n html
to_string_matrix html
try_car_anova html
ungroup_stats html
univariate html
unlist_and_blank_na html
update_weights_strat_wilson html
utils_split_funs html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘tern’ as ‘tern_0.9.4_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (tern)