* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘tci’ ...
** package ‘tci’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
using C++11
make[1]: Entering directory '/tmp/RtmpAiJ4CG/R.INSTALL1171e124907e56/tci/src'
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c pk_cpp_functions.cpp -o pk_cpp_functions.o
pk_cpp_functions.cpp: In function ‘arma::mat pksol1cpt(arma::vec&, arma::vec&, arma::vec&, arma::vec&, arma::vec&, double)’:
pk_cpp_functions.cpp:46:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
46 | for(int j = 0; j < begin.size(); j++){
| ~~^~~~~~~~~~~~~~
pk_cpp_functions.cpp: In function ‘arma::mat pksol2cpt(arma::vec&, arma::vec&, arma::vec&, arma::vec&, arma::vec&, arma::vec&)’:
pk_cpp_functions.cpp:165:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
165 | for(int j = 0; j < begin.size(); j++){
| ~~^~~~~~~~~~~~~~
pk_cpp_functions.cpp: In function ‘arma::mat pksol3cpt(arma::vec&, arma::vec&, arma::vec&, arma::vec&, arma::vec&, arma::vec&)’:
pk_cpp_functions.cpp:312:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
312 | for(int j = 0; j < begin.size(); j++){
| ~~^~~~~~~~~~~~~~
pk_cpp_functions.cpp: In function ‘arma::mat pksol3cptm(arma::vec&, arma::vec&, arma::vec&, arma::vec&, arma::vec&, arma::vec&)’:
pk_cpp_functions.cpp:468:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
468 | for(int j = 0; j < begin.size(); j++){
| ~~^~~~~~~~~~~~~~
g++-13 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o tci.so RcppExports.o pk_cpp_functions.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpAiJ4CG/R.INSTALL1171e124907e56/tci/src'
make[1]: Entering directory '/tmp/RtmpAiJ4CG/R.INSTALL1171e124907e56/tci/src'
make[1]: Leaving directory '/tmp/RtmpAiJ4CG/R.INSTALL1171e124907e56/tci/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-tci/00new/tci/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘tci’
finding HTML links ... done
apply_tci html
assign_pars html
bayes_update html
clc html
eleveld_pd html
eleveld_pk html
elvdlpars html
emax html
emax_eleveld html
emax_inv html
emax_inv_eleveld html
emax_inv_remi html
emax_remi html
format_pars html
inf_manual html
inf_tci html
infer_pkfn html
init_pkmod html
init_poppkmod html
list_parnms html
list_pkmods html
log_likelihood html
log_posterior_neg html
log_prior html
olc html
pkmod html
pkmod1cpt html
pkmod2cpt html
pkmod3cpt html
pkmod3cptm html
pkmod_eleveld_ppf html
pkmod_eleveld_remi html
pkmod_kim html
pkmod_marsh html
pkmod_minto html
pkmod_schnider html
plot.sim_tci html
poppkmod html
predict.pkmod html
predict.poppkmod html
print.pkmod html
print.poppkmod html
print.sim_tci html
sample_iiv html
sample_pkmod html
simulate.pkmod html
simulate.poppkmod html
simulate_clc html
simulate_olc html
simulate_tci html
tci_documentation html
tci_effect html
tci_effect_only html
tci_plasma html
update.pkmod html
validate_pkmod html
validate_poppkmod html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (tci)