* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘taxodist’ ... ** this is package ‘taxodist’ version ‘0.7.0’ ** package ‘taxodist’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘taxodist’ finding HTML links ... done cache_info html check_coverage html clear_cache html closest_relative html compare_lineages html distance_matrix html filter_clade html focal_distances html get_lineage html get_lineage_by_id html get_taxonomicon_id html is_member html lineage_depth html load_cache html mrca html plot.taxodist_cluster html plot.taxodist_ord html print.taxodist_focal html print.taxodist_path html print.taxodist_result html save_cache html shared_clades html summary.taxodist_ord html taxo_cluster html taxo_distance html taxo_heatmap html taxo_ordinate html taxo_path html taxo_search html taxobase html taxodist-package html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (taxodist)