* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘taxify’ ... ** this is package ‘taxify’ version ‘0.5.0’ ** package ‘taxify’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘taxify’ finding HTML links ... done add_algae_traits html add_alien_first_records html add_alpine_carabids html add_amniote html add_amphibio html add_anage html add_animaltraits html add_arctic_traits html add_arthropod_traits html add_austraits html add_avonet html add_bacdive html add_baseflor html add_bee_ostwald html add_bet html add_betsi_collembola_body_length html add_betsi_collembola_traits html add_betsi_earthworm_traits html add_beukhof html add_bien html add_birdbase html add_blanchard html add_brot html add_bryoatt html add_ccdb html add_cefas_btrait html add_chelonians html add_chowdhury html add_classification html add_clopla html add_col_info html add_combine html add_combine_imputed html add_combine_reported html add_common_names html add_copepod_traits html add_coral_traits html add_data html add_diaz_traits html add_disperse html add_eberswalde html add_ecoflora html add_ecomorphosis html add_edwards_phyto html add_eive html add_ellers_collembola html add_elton_traits html add_epa_freshwater html add_eupolltrait html add_eurobat html add_faprotax html add_finand html add_fishbase html add_fishmorph html add_fishtraits html add_floraweb html add_freshwater_insects_conus html add_frugivoria html add_fungal_traits html add_fungalroot html add_funguild html add_gbif_info html add_gidias html add_gift html add_globi html add_globtherm html add_glonaf html add_gmpd html add_griis html add_groot html add_gwdd html add_homerange html add_hosts html add_huang_amph html add_hybrid_info html add_hydraulics html add_imageomics_neon html add_inrae_collembola_traits html add_invacost html add_italic html add_iucn html add_kew_cvalues html add_kew_sid html add_leda html add_leptraits html add_madin html add_monograph_collembola_body_length html add_nesttrait html add_noddb html add_nztd html add_octocoral html add_odonata html add_pantheria html add_parravicini html add_pelagic html add_phylacine html add_pignatti html add_plantatt html add_plazi_collembola_body_length html add_pottier html add_quimbayo html add_ramond html add_repttraits html add_rimet_phyto html add_saproxylic html add_sealifebase html add_sharkipedia html add_sheld html add_spider_traits html add_sworm html add_tetradensity html add_thermofresh html add_trait html add_tree_of_sex html add_usda_fungus_host html add_useful_plants html add_virion html add_wcvp html add_wfo_info html add_zanne html add_zooplankton html candidate_order html children html cite html class2tree html comm2sci html downstream html embed_accepted html enrichment_cols html enrichment_groups html export_data html gift_traits html id2name html inspect html install_backbones html is_aggregate_name html list_backbones html list_enrichments html list_traits html lookup_genus html lowest_common html normalize_aggregate_name html normalize_epithets html parse_name html precompute_keys html print.taxify_inspection html print.taxify_result html reconcile html region-filter html sci2comm html score_candidates html sub-.taxify_result html summary.taxify_result html synonyms html taxify-package html taxify html taxify_build html taxify_build_register html taxify_candidates html taxify_clear_cache html taxify_data_dir html taxify_databases html taxify_download html taxify_download_enrichment html taxify_example_data html taxify_load_register html taxify_lock html taxify_long html taxify_refresh_manifest html taxify_regions html taxify_register_coverage html taxify_restore html taxify_store html trait_info html upstream html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (taxify)