* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘stpphawkes’ ...
** this is package ‘stpphawkes’ version ‘0.2.2’
** package ‘stpphawkes’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpM2uNMo/R.INSTALLb22fc2543bff2/stpphawkes/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c areapl.cpp -o areapl.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c condInt_mcmc_stpp.cpp -o condInt_mcmc_stpp.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c condInt_mcmc_stpp_branching.cpp -o condInt_mcmc_stpp_branching.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c condInt_mcmc_stpp_branching_md.cpp -o condInt_mcmc_stpp_branching_md.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c condInt_mcmc_stpp_branching_nonunif.cpp -o condInt_mcmc_stpp_branching_nonunif.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c condInt_mcmc_stpp_branching_nonunif_md.cpp -o condInt_mcmc_stpp_branching_nonunif_md.o
condInt_mcmc_stpp_branching_nonunif_md.cpp: In function ‘Rcpp::List condInt_mcmc_stpp_branching_nonunif_md(Rcpp::DataFrame, arma::mat, double, std::vector<int, std::allocator<int> >, double, double, double, double, double, double, double, double, arma::mat, std::vector<double>, std::vector<double>, std::vector<double>, std::vector<double>, double, double, std::vector<double>, std::vector<double>, std::vector<double>, std::vector<double>, int, int, bool, bool)’:
condInt_mcmc_stpp_branching_nonunif_md.cpp:354:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  354 |         for (int i = 0; i < z_curr_t_all.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c condInt_mcmc_temporal.cpp -o condInt_mcmc_temporal.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c condInt_mcmc_temporal_branching.cpp -o condInt_mcmc_temporal_branching.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c condInt_mcmc_temporal_branching_md.cpp -o condInt_mcmc_temporal_branching_md.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c condInt_mcmc_temporal_md.cpp -o condInt_mcmc_temporal_md.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c helper_functions.cpp -o helper_functions.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c homo_ppp.cpp -o homo_ppp.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c model_likelihood.cpp -o model_likelihood.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c nonunif_ppp.cpp -o nonunif_ppp.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c polygon.cpp -o polygon.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c ptinpoly.cpp -o ptinpoly.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c simulate_stpp_hawkes.cpp -o simulate_stpp_hawkes.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c simulate_stpp_hawkes_nonunif.cpp -o simulate_stpp_hawkes_nonunif.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c simulate_temporal_hawkes.cpp -o simulate_temporal_hawkes.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c spatio_temporal_common.cpp -o spatio_temporal_common.o
spatio_temporal_common.cpp: In function ‘double stpp::sample_a_accumulate(const std::vector<double>&, double, double)’:
spatio_temporal_common.cpp:16:12: warning: unused variable ‘epsilon’ [-Wunused-variable]
   16 |     double epsilon = t_max - 36.0 / b_curr;
      |            ^~~~~~~
spatio_temporal_common.cpp: In function ‘std::vector<int, std::allocator<int> > stpp::sample_y(const std::vector<double>&, const std::vector<double>&, const std::vector<double>&, double, double, double, double, arma::mat)’:
spatio_temporal_common.cpp:67:12: warning: unused variable ‘epsilon’ [-Wunused-variable]
   67 |     double epsilon = 36.0 / b_curr;
      |            ^~~~~~~
spatio_temporal_common.cpp: In function ‘double stpp::b_posterior(const std::vector<double>&, double, double, double, const std::vector<double>&, const std::vector<double>&)’:
spatio_temporal_common.cpp:112:12: warning: unused variable ‘epsilon’ [-Wunused-variable]
  112 |     double epsilon = t_max - 38 / b;
      |            ^~~~~~~
spatio_temporal_common.cpp: In function ‘double stpp::missing_data::log_lik(std::vector<double>&, std::vector<double>&, std::vector<double>&, double, double, double, double, double, arma::mat)’:
spatio_temporal_common.cpp:205:12: warning: unused variable ‘epsilon’ [-Wunused-variable]
  205 |     double epsilon = 36.0 / b;
      |            ^~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c spatio_temporal_common_nonunif.cpp -o spatio_temporal_common_nonunif.o
spatio_temporal_common_nonunif.cpp: In function ‘double stpp_nonunif::sample_a_accumulate(const std::vector<double>&, double, double)’:
spatio_temporal_common_nonunif.cpp:16:10: warning: unused variable ‘epsilon’ [-Wunused-variable]
   16 |   double epsilon = t_max - 36.0 / b_curr;
      |          ^~~~~~~
spatio_temporal_common_nonunif.cpp: In function ‘std::vector<int, std::allocator<int> > stpp_nonunif::sample_y(const std::vector<double>&, const std::vector<double>&, const std::vector<double>&, double, double, double, double, double, double, double, double)’:
spatio_temporal_common_nonunif.cpp:100:10: warning: unused variable ‘epsilon’ [-Wunused-variable]
  100 |   double epsilon = 36.0 / b_curr;
      |          ^~~~~~~
spatio_temporal_common_nonunif.cpp: In function ‘double stpp_nonunif::b_posterior(const std::vector<double>&, double, double, double, const std::vector<double>&, const std::vector<double>&)’:
spatio_temporal_common_nonunif.cpp:152:10: warning: unused variable ‘epsilon’ [-Wunused-variable]
  152 |   double epsilon = t_max - 38 / b;
      |          ^~~~~~~
spatio_temporal_common_nonunif.cpp: In function ‘double stpp_nonunif::missing_data::log_lik(std::vector<double>&, std::vector<double>&, std::vector<double>&, double, double, double, double, double, double, double, double, double)’:
spatio_temporal_common_nonunif.cpp:235:11: warning: unused variable ‘epsilon’ [-Wunused-variable]
  235 |    double epsilon = 36.0 / b;
      |           ^~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c temporal_catmark.cpp -o temporal_catmark.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c temporal_catmark_common.cpp -o temporal_catmark_common.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c temporal_catmark_md.cpp -o temporal_catmark_md.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c temporal_common.cpp -o temporal_common.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c temporal_contmark.cpp -o temporal_contmark.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c temporal_contmark_common.cpp -o temporal_contmark_common.o
temporal_contmark_common.cpp: In function ‘double contmark::sample_wscale(const std::vector<double>&, const std::vector<double>&, double)’:
temporal_contmark_common.cpp:16:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   16 |   for(int i = 0; i < marks.size(); ++i){
      |                  ~~^~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "RcppGSL:::CFlags()"` -fpic  -g -O2 -Wall -pedantic -mtune=native   -c utilities.cpp -o utilities.o
'LdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
'RcppLdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o stpphawkes.so RcppExports.o areapl.o condInt_mcmc_stpp.o condInt_mcmc_stpp_branching.o condInt_mcmc_stpp_branching_md.o condInt_mcmc_stpp_branching_nonunif.o condInt_mcmc_stpp_branching_nonunif_md.o condInt_mcmc_temporal.o condInt_mcmc_temporal_branching.o condInt_mcmc_temporal_branching_md.o condInt_mcmc_temporal_md.o helper_functions.o homo_ppp.o model_likelihood.o nonunif_ppp.o polygon.o ptinpoly.o simulate_stpp_hawkes.o simulate_stpp_hawkes_nonunif.o simulate_temporal_hawkes.o spatio_temporal_common.o spatio_temporal_common_nonunif.o temporal_catmark.o temporal_catmark_common.o temporal_catmark_md.o temporal_common.o temporal_contmark.o temporal_contmark_common.o utilities.o -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
'LdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
'RcppLdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpM2uNMo/R.INSTALLb22fc2543bff2/stpphawkes/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpM2uNMo/R.INSTALLb22fc2543bff2/stpphawkes/src'
'LdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
'RcppLdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpM2uNMo/R.INSTALLb22fc2543bff2/stpphawkes/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-stpphawkes/00new/stpphawkes/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘stpphawkes’
    finding HTML links ... done
    areapl                                  html  
    homog.STPP                              html  
    intensity_temporal                      html  
    mcmc_stpp                               html  
    mcmc_stpp_nonunif                       html  
    mcmc_temporal                           html  
    mcmc_temporal_catmark                   html  
    mcmc_temporal_contmark                  html  
    pip                                     html  
    ptinpoly                                html  
    simulate_hawkes_stpp                    html  
    simulate_hawkes_stpp_nonunif            html  
    simulate_temporal                       html  
    stpp.mle                                html  
    stpp.mle.nonunif                        html  
    stpphawkes                              html  
    temporal.catmark.mle                    html  
    temporal.mle                            html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (stpphawkes)