* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘stochQN’ ...
** package ‘stochQN’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmpV6KKHf/R.INSTALL1ddd2323c516b/stochQN/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -D_FOR_R -DUSE_FC_LEN_T -I"../inst/include"  -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fvisibility=hidden -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c Rwrapper.c -o Rwrapper.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -D_FOR_R -DUSE_FC_LEN_T -I"../inst/include"  -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fvisibility=hidden -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c stochqn.c -o stochqn.o
stochqn.c:308:1: warning: ‘visibility’ attribute ignored on non-class types [-Wattributes]
  308 | {
      | ^
stochqn.c:350:1: warning: ‘visibility’ attribute ignored on non-class types [-Wattributes]
  350 | {
      | ^
stochqn.c:473:1: warning: ‘visibility’ attribute ignored on non-class types [-Wattributes]
  473 | {
      | ^
stochqn.c:492:1: warning: ‘visibility’ attribute ignored on non-class types [-Wattributes]
  492 | {
      | ^
stochqn.c:518:1: warning: ‘visibility’ attribute ignored on non-class types [-Wattributes]
  518 | {
      | ^
stochqn.c: In function ‘check_inf_nan’:
stochqn.c:255:41: warning: ‘cancel for’ inside ‘nowait’ for construct
  255 |                                 #pragma omp cancel for
      |                                         ^~~
stochqn.c:260:41: warning: ‘cancel for’ inside ‘nowait’ for construct
  260 |                                 #pragma omp cancel for
      |                                         ^~~
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o stochQN.so Rwrapper.o stochqn.o -fopenmp -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpV6KKHf/R.INSTALL1ddd2323c516b/stochQN/src'
make[1]: Entering directory '/tmp/RtmpV6KKHf/R.INSTALL1ddd2323c516b/stochQN/src'
make[1]: Leaving directory '/tmp/RtmpV6KKHf/R.INSTALL1ddd2323c516b/stochQN/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-stochQN/00new/stochQN/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘stochQN’
    finding HTML links ... done
    SQN                                     html  
    SQN_free                                html  
    adaQN                                   html  
    adaQN_free                              html  
    coef.stoch_logistic                     html  
    get_curr_x                              html  
    get_iteration_number                    html  
    oLBFGS                                  html  
    oLBFGS_free                             html  
    partial_fit                             html  
    partial_fit_logistic                    html  
    predict.stochQN_guided                  html  
    predict.stoch_logistic                  html  
    print.SQN                               html  
    print.SQN_free                          html  
    print.adaQN                             html  
    print.adaQN_free                        html  
    print.oLBFGS                            html  
    print.oLBFGS_free                       html  
    print.stoch_logistic                    html  
    run_SQN_free                            html  
    run_adaQN_free                          html  
    run_oLBFGS_free                         html  
    stochastic.logistic.regression          html  
    summary.stoch_logistic                  html  
    update_fun                              html  
    update_gradient                         html  
    update_hess_vec                         html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (stochQN)