- using R version 4.5.1 Patched (2025-09-13 r88837)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-14 (Debian 14.3.0-7) 14.3.0
GNU Fortran (Debian 14.3.0-7) 14.3.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
- checking for file ‘spinifex/DESCRIPTION’ ... OK
- this is package ‘spinifex’ version ‘0.3.9’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘spinifex’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [2s/2s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
- checking whether the package can be unloaded cleanly ... [1s/2s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
- checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
- checking loading without being on the library search path ... [2s/2s] OK
- checking whether startup messages can be suppressed ... [2s/3s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [13s/20s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/1s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [34s/43s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
BreastCancer_na.rm 3.919 0.252 6.985
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [127s/152s] ERROR
Running ‘spelling.R’ [0s/0s]
Running ‘testthat.R’ [126s/151s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(spinifex)
Loading required package: tourr
--------------------------------------------------------
spinifex --- version 0.3.9
Please share bugs, suggestions, and feature requests at:
https://github.com/nspyrison/spinifex/issues/
--------------------------------------------------------
Attaching package: 'spinifex'
The following objects are masked from 'package:tourr':
is_orthonormal, save_history
>
> test_check("spinifex")
Target: 0.861, 2.2% better
Target: 0.876, 1.8% better
Target: 0.998, 13.9% better
Target: 1.014, 1.6% better
Target: 1.026, 1.2% better
Target: 1.039, 1.2% better
Target: 1.041, 0.3% better
Target: 1.043, 0.1% better
Target: 1.044, 0.1% better
No better bases found after 25 tries. Giving up.
Final projection:
0.252 0.014
-0.676 0.097
-0.205 -0.603
-0.660 0.045
-0.040 0.790
Target: 0.905, 5.5% better
Target: 0.931, 2.8% better
Target: 0.949, 2.0% better
Target: 0.956, 0.7% better
Target: 0.963, 0.6% better
Target: 0.967, 0.4% better
Target: 0.976, 1.0% better
Target: 0.979, 0.2% better
Target: 0.993, 1.4% better
Target: 0.996, 0.3% better
Target: 0.997, 0.1% better
No better bases found after 25 tries. Giving up.
Final projection:
-0.360 0.755
0.145 0.129
-0.706 0.101
-0.087 0.233
0.585 0.590
Target: 0.536, 123.1% better
Target: 0.559, 4.2% better
Target: 0.570, 2.0% better
Target: 0.577, 1.2% better
Target: 0.588, 1.8% better
Target: 0.595, 1.2% better
Target: 0.597, 0.4% better
Target: 0.598, 0.1% better
Target: 0.606, 1.3% better
Target: 0.607, 0.3% better
Target: 0.608, 0.1% better
Target: 0.609, 0.2% better
Target: 0.610, 0.1% better
No better bases found after 30 tries. Giving up.
Final projection:
0.443 -0.369
-0.209 0.726
0.502 0.230
-0.474 -0.525
0.533 -0.092
Attaching package: 'ggplot2'
The following objects are masked from 'package:spinifex':
scale_colour_discrete, scale_fill_discrete
Target: 0.914, 8.6% better
Target: 0.919, 0.5% better
`nframes` and `fps` adjusted to match transition
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 90 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-2_ggproto_visualize.r:53:1'): (code run outside of `test_that()`) ──
Error in `UseMethod("layout")`: no applicable method for 'layout' applied to an object of class "c('ggplot2::ggplot', 'ggplot', 'ggplot2::gg', 'S7_object', 'gg')"
Backtrace:
▆
1. ├─spinifex::animate_plotly(gg_mt) at test-2_ggproto_visualize.r:53:1
2. │ └─... %>% ...
3. └─plotly::layout(...)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 90 ]
Error: Test failures
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [24s/37s] OK
- checking PDF version of manual ... [11s/14s] OK
- checking HTML version of manual ... [3s/4s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR