* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘spdep’ ...
** package ‘spdep’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-5) 13.2.0’
make[1]: Entering directory '/tmp/RtmpK459H1/R.INSTALL3f75f629f20382/spdep/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c card.c -o card.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c dfs_ncomp.c -o dfs_ncomp.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c dnn.c -o dnn.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c gabriel.c -o gabriel.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c gearyw.c -o gearyw.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c gsymtest.c -o gsymtest.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c insiders.c -o insiders.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c jc.c -o jc.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c knn.c -o knn.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c lagw.c -o lagw.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c listw2sn.c -o listw2sn.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c nbdists.c -o nbdists.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c perm_no_replace.c -o perm_no_replace.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c polypoly.c -o polypoly.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c relative.c -o relative.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c skater.c -o skater.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c symtest.c -o symtest.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o spdep.so card.o dfs_ncomp.o dnn.o gabriel.o gearyw.o gsymtest.o init.o insiders.o jc.o knn.o lagw.o listw2sn.o nbdists.o perm_no_replace.o polypoly.o relative.o skater.o symtest.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpK459H1/R.INSTALL3f75f629f20382/spdep/src'
make[1]: Entering directory '/tmp/RtmpK459H1/R.INSTALL3f75f629f20382/spdep/src'
make[1]: Leaving directory '/tmp/RtmpK459H1/R.INSTALL3f75f629f20382/spdep/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-spdep/00new/spdep/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘spdep’
    finding HTML links ... done
    COL.OLD                                 html  
    EBImoran.mc                             html  
    EBest                                   html  
    EBlocal                                 html  
    LOSH                                    html  
    LOSH.cs                                 html  
    LOSH.mc                                 html  
    aggregate.nb                            html  
    airdist                                 html  
    autocov_dist                            html  
    bhicv                                   html  
    card                                    html  
    cell2nb                                 html  
    choynowski                              html  
    columbus                                html  
    compon                                  html  
    diffnb                                  html  
    dnearneigh                              html  
    droplinks                               html  
    edit.nb                                 html  
    eire                                    html  
    geary                                   html  
    geary.mc                                html  
    geary.test                              html  
    globalG.test                            html  
    graphneigh                              html  
    grid2nb                                 html  
    hotspotmap                              html  
    include.self                            html  
    joincount.mc                            html  
    joincount.multi                         html  
    joincount.test                          html  
    knearneigh                              html  
    knn2nb                                  html  
    lag.listw                               html  
    lee                                     html  
    lee.mc                                  html  
    lee.test                                html  
    listw2sn                                html  
    lm.LMtests                              html  
    lm.morantest                            html  
    lm.morantest.exact                      html  
    lm.morantest.sad                        html  
    localC                                  html  
    localG                                  html  
    localGS                                 html  
    local_joincount_bv                      html  
    local_joincount_uni                     html  
    localmoran                              html  
    localmoran.exact                        html  
    localmoran.sad                          html  
    localmoran_bv                           html  
    mat2listw                               html  
    moran                                   html  
    moran.mc                                html  
    moran.plot                              html  
    moran.test                              html  
    moran_bv                                html  
    mstree                                  html  
    nb2INLA                                 html  
    nb2WB                                   html  
    nb2blocknb                              html  
    nb2lines                                html  
    nb2listw                                html  
    nb2listwdist                            html  
    nb2mat                                  html  
    nbcosts                                 html  
    nbdists                                 html  
    nblag                                   html  
    nboperations                            html  
    p.adjustSP                              html  
    plot.mst                                html  
    plot.nb                                 html  
    plot.skater                             html  
    poly2nb                                 html  
    probmap                                 html  
    prunecost                               html  
    prunemst                                html  
    read.gal                                html  
    read.gwt2nb                             html  
    rotation                                html  
    set.mcOption                            html  
    set.spChkOption                         html  
    skater                                  html  
    sp.correlogram                          html  
    sp.mantel.mc                            html  
    spdep-defunct                           html  
    spdep                                   html  
    spweights.constants                     html  
    ssw                                     html  
    subset.listw                            html  
    subset.nb                               html  
    summary.nb                              html  
    testnb                                  html  
    tolerance.nb                            html  
    tri2nb                                  html  
    write.nb.gal                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (spdep)