* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘sirt’ ...
** package ‘sirt’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/Rtmp27mjpY/R.INSTALL302db63c658cea/sirt/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c gooijer_isop_rcpp.cpp -o gooijer_isop_rcpp.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c matrixfunctions_sirt_rcpp.cpp -o matrixfunctions_sirt_rcpp.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c mle_pcm_group_rcpp.cpp -o mle_pcm_group_rcpp.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c probs_multcat_items_counts_rcpp.cpp -o probs_multcat_items_counts_rcpp.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c rm_smirt_mml2_rcpp.cpp -o rm_smirt_mml2_rcpp.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sirt_rcpp_ccov.cpp -o sirt_rcpp_ccov.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sirt_rcpp_discrete_inverse.cpp -o sirt_rcpp_discrete_inverse.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sirt_rcpp_eigenvalues.cpp -o sirt_rcpp_eigenvalues.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sirt_rcpp_evm_comp_poly.cpp -o sirt_rcpp_evm_comp_poly.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sirt_rcpp_gom_em.cpp -o sirt_rcpp_gom_em.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sirt_rcpp_inference_jackknife.cpp -o sirt_rcpp_inference_jackknife.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sirt_rcpp_invariance_alignment.cpp -o sirt_rcpp_invariance_alignment.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sirt_rcpp_linking_haebara.cpp -o sirt_rcpp_linking_haebara.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sirt_rcpp_lq_fit.cpp -o sirt_rcpp_lq_fit.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sirt_rcpp_mgsem_functions.cpp -o sirt_rcpp_mgsem_functions.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sirt_rcpp_monoreg.cpp -o sirt_rcpp_monoreg.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sirt_rcpp_noharm.cpp -o sirt_rcpp_noharm.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sirt_rcpp_pbvnorm.cpp -o sirt_rcpp_pbvnorm.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sirt_rcpp_polychoric2.cpp -o sirt_rcpp_polychoric2.o
In file included from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/RcppCommon.h:188,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:25,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29,
                 from sirt_rcpp_polychoric2.cpp:7:
In function ‘SEXPREC* Rcpp::internal::primitive_wrap__impl__cast(const T&, Rcpp::traits::false_type) [with T = double]’,
    inlined from ‘SEXPREC* Rcpp::internal::primitive_wrap__impl(const T&, Rcpp::traits::r_type_primitive_tag) [with T = double]’ at /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/Rcpp/internal/wrap.h:465:46,
    inlined from ‘SEXPREC* Rcpp::internal::primitive_wrap(const T&) [with T = double]’ at /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/Rcpp/internal/wrap.h:489:40,
    inlined from ‘SEXPREC* Rcpp::internal::wrap_dispatch(const T&, Rcpp::traits::wrap_type_primitive_tag) [with T = double]’ at /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/Rcpp/internal/wrap.h:744:34,
    inlined from ‘SEXPREC* Rcpp::wrap(const T&) [with T = double]’ at /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/Rcpp/internal/wrap_end.h:30:38,
    inlined from ‘static SEXPREC* Rcpp::internal::generic_element_converter<RTYPE>::get(const T&) [with T = double; int RTYPE = 19]’ at /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/Rcpp/vector/converter.h:80:23,
    inlined from ‘static void Rcpp::Vector<RTYPE, StoragePolicy>::replace_element__dispatch__isArgument(Rcpp::traits::false_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object<double>; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/Rcpp/vector/Vector.h:532:13,
    inlined from ‘static void Rcpp::Vector<RTYPE, StoragePolicy>::replace_element__dispatch(Rcpp::traits::true_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object<double>; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/Rcpp/vector/Vector.h:525:46,
    inlined from ‘static void Rcpp::Vector<RTYPE, StoragePolicy>::replace_element(iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object<double>; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/Rcpp/vector/Vector.h:514:34,
    inlined from ‘static Rcpp::Vector<RTYPE, StoragePolicy> Rcpp::Vector<RTYPE, StoragePolicy>::create__dispatch(Rcpp::traits::true_type, const T1&, const T2&, const T3&, const T4&, const T5&, const T6&, const T7&, const T8&) [with T1 = Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >; T2 = Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >; T3 = Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >; T4 = Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >; T5 = Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >; T6 = Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >; T7 = Rcpp::traits::named_object<int>; T8 = Rcpp::traits::named_object<double>; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/Rcpp/generated/Vector__create.h:433:24,
    inlined from ‘static Rcpp::Vector<RTYPE, StoragePolicy> Rcpp::Vector<RTYPE, StoragePolicy>::create(const T1&, const T2&, const T3&, const T4&, const T5&, const T6&, const T7&, const T8&) [with T1 = Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >; T2 = Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >; T3 = Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >; T4 = Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >; T5 = Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >; T6 = Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >; T7 = Rcpp::traits::named_object<int>; T8 = Rcpp::traits::named_object<double>; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/Rcpp/generated/Vector__create.h:394:45,
    inlined from ‘Rcpp::List sirt_rcpp_polychoric2_est_itempair(Rcpp::NumericVector, Rcpp::NumericVector, int, int, int, double, double, Rcpp::NumericVector)’ at sirt_rcpp_polychoric2.cpp:325:9:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/Rcpp/internal/wrap.h:442:41: warning: ‘der’ may be used uninitialized [-Wmaybe-uninitialized]
  442 |             r_vector_start<RTYPE>(x)[0] = object;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
sirt_rcpp_polychoric2.cpp: In function ‘Rcpp::List sirt_rcpp_polychoric2_est_itempair(Rcpp::NumericVector, Rcpp::NumericVector, int, int, int, double, double, Rcpp::NumericVector)’:
sirt_rcpp_polychoric2.cpp:276:18: note: ‘der’ was declared here
  276 |     double incr, der;
      |                  ^~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sirt_rcpp_rm_proc_data.cpp -o sirt_rcpp_rm_proc_data.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sirt_rcpp_rm_sdt.cpp -o sirt_rcpp_rm_sdt.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pbv/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sirt_rcpp_xxirt.cpp -o sirt_rcpp_xxirt.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o sirt.so RcppExports.o gooijer_isop_rcpp.o matrixfunctions_sirt_rcpp.o mle_pcm_group_rcpp.o probs_multcat_items_counts_rcpp.o rm_smirt_mml2_rcpp.o sirt_rcpp_ccov.o sirt_rcpp_discrete_inverse.o sirt_rcpp_eigenvalues.o sirt_rcpp_evm_comp_poly.o sirt_rcpp_gom_em.o sirt_rcpp_inference_jackknife.o sirt_rcpp_invariance_alignment.o sirt_rcpp_linking_haebara.o sirt_rcpp_lq_fit.o sirt_rcpp_mgsem_functions.o sirt_rcpp_monoreg.o sirt_rcpp_noharm.o sirt_rcpp_pbvnorm.o sirt_rcpp_polychoric2.o sirt_rcpp_rm_proc_data.o sirt_rcpp_rm_sdt.o sirt_rcpp_xxirt.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp27mjpY/R.INSTALL302db63c658cea/sirt/src'
make[1]: Entering directory '/tmp/Rtmp27mjpY/R.INSTALL302db63c658cea/sirt/src'
make[1]: Leaving directory '/tmp/Rtmp27mjpY/R.INSTALL302db63c658cea/sirt/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-sirt/00new/sirt/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘sirt’
    finding HTML links ... done
    IRT.mle                                 html  
    Q3                                      html  
    Q3.testlet                              html  
    R2conquest                              html  
    R2noharm.EAP                            html  
    R2noharm                                html  
    R2noharm.jackknife                      html  
    automatic.recode                        html  
    brm.sim                                 html  
    btm                                     html  
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    ccov.np                                 html  
    cfa_meas_inv                            html  
    class.accuracy.rasch                    html  
    conf.detect                             html  
    data.activity.itempars                  html  
    data.befki                              html  
    data.big5                               html  
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    data.eid                                html  
    data.ess2005                            html  
    data.g308                               html  
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    data.long                               html  
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    data.math                               html  
    data.mcdonald                           html  
    data.mixed1                             html  
    data.ml                                 html  
    data.noharm                             html  
    data.pars1.rasch                        html  
    data.pirlsmissing                       html  
    data.pisaMath                           html  
    data.pisaPars                           html  
    data.pisaRead                           html  
    data.pw01                               html  
    data.ratings1                           html  
    data.raw1                               html  
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    data.reck                               html  
    data.si                                 html  
    data.timss                              html  
    data.timss07.G8.RUS                     html  
    data.trees                              html  
    data.wide2long                          html  
    detect.index                            html  
    dif.logistic.regression                 html  
    dif.strata.variance                     html  
    dif.variance                            html  
    dirichlet.mle                           html  
    dirichlet.simul                         html  
    dmlavaan                                html  
    eigenvalues.manymatrices                html  
    equating.rasch                          html  
    equating.rasch.jackknife                html  
    expl.detect                             html  
    f1d.irt                                 html  
    fit.isop                                html  
    fuzcluster                              html  
    fuzdiscr                                html  
    gom.em                                  html  
    gom.jml                                 html  
    greenyang.reliability                   html  
    invariance.alignment                    html  
    isop                                    html  
    isop.scoring                            html  
    isop.test                               html  
    latent.regression.em.raschtype          html  
    lavaan2mirt                             html  
    lc.2raters                              html  
    likelihood.adjustment                   html  
    linking.haberman                        html  
    linking.haebara                         html  
    linking.robust                          html  
    lq_fit                                  html  
    lsdm                                    html  
    lsem.estimate                           html  
    lsem.permutationTest                    html  
    lsem.test                               html  
    marginal.truescore.reliability          html  
    matrixfunctions.sirt                    html  
    mcmc.2pno                               html  
    mcmc.2pno.ml                            html  
    mcmc.2pnoh                              html  
    mcmc.3pno.testlet                       html  
    mcmc.list.descriptives                  html  
    mcmc_Rhat                               html  
    mcmc_coef                               html  
    mcmclist2coda                           html  
    md.pattern.sirt                         html  
    mgsem                                   html  
    mirt.specify.partable                   html  
    mirt.wrapper                            html  
    mle.pcm.group                           html  
    modelfit.sirt                           html  
    monoreg.rowwise                         html  
    nedelsky.sim                            html  
    noharm.sirt                             html  
    np.dich                                 html  
    parmsummary_extend                      html  
    pbivnorm2                               html  
    pcm.conversion                          html  
    pcm.fit                                 html  
    person.parameter.rasch.copula           html  
    personfit.stat                          html  
    pgenlogis                               html  
    plausible.value.imputation.raschtype    html  
    plot.mcmc.sirt                          html  
    plot.np.dich                            html  
    polychoric2                             html  
    prior_model_parse                       html  
    prmse.subscores.scales                  html  
    prob.guttman                            html  
    qmc.nodes                               html  
    rasch.copula                            html  
    rasch.evm.pcm                           html  
    rasch.jml                               html  
    rasch.jml.biascorr                      html  
    rasch.jml.jackknife1                    html  
    rasch.mirtlc                            html  
    rasch.mml                               html  
    rasch.pairwise                          html  
    rasch.pairwise.itemcluster              html  
    rasch.pml3                              html  
    rasch.prox                              html  
    rasch.va                                html  
    reliability.nonlinearSEM                html  
    resp_groupwise                          html  
    rinvgamma2                              html  
    rm.facets                               html  
    rm.sdt                                  html  
    rmvn                                    html  
    scale_group_means                       html  
    sia.sirt                                html  
    sim.qm.ramsay                           html  
    sim.rasch.dep                           html  
    sim.raschtype                           html  
    sirt-defunct                            html  
    sirt-package                            html  
    sirt-utilities                          html  
    sirt_eigenvalues                        html  
    smirt                                   html  
    stratified.cronbach.alpha               html  
    summary.mcmc.sirt                       html  
    tam2mirt                                html  
    testlet.marginalized                    html  
    tetrachoric2                            html  
    truescore.irt                           html  
    unidim.test.csn                         html  
    wle.rasch                               html  
    wle.rasch.jackknife                     html  
    xxirt                                   html  
    xxirt_createParTable                    html  
    xxirt_createThetaDistribution           html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (sirt)