* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘simfam’ ...
** package ‘simfam’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmpXPMQRh/R.INSTALLdaaae120da435/simfam/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c geno_fam_cpp.cpp -o geno_fam_cpp.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o simfam.so RcppExports.o geno_fam_cpp.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpXPMQRh/R.INSTALLdaaae120da435/simfam/src'
make[1]: Entering directory '/tmp/RtmpXPMQRh/R.INSTALLdaaae120da435/simfam/src'
make[1]: Leaving directory '/tmp/RtmpXPMQRh/R.INSTALLdaaae120da435/simfam/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-simfam/00new/simfam/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘simfam’
    finding HTML links ... done
    admix_fam                               html  
    admix_last_gen                          html  
    draw_sex                                html  
    fam_ancestors                           html  
    geno_fam                                html  
    geno_last_gen                           html  
    kinship_fam                             html  
    kinship_last_gen                        html  
    prune_fam                               html  
    recomb_admix_inds                       html  
    recomb_fam                              html  
    recomb_geno_inds                        html  
    recomb_haplo_inds                       html  
    recomb_init_founders                    html  
    recomb_last_gen                         html  
    recomb_map_fix_ends_chr                 html  
    recomb_map_hg                           html  
    recomb_map_inds                         html  
    recomb_map_simplify_chr                 html  
    sim_pedigree                            html  
    simfam-package                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (simfam)