* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘simecol’ ...
** package ‘simecol’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/RtmpuxcEJI/R.INSTALL2b360539007893/simecol/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c R_init_simecol.c -o R_init_simecol.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c simecol.c -o simecol.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o simecol.so R_init_simecol.o simecol.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpuxcEJI/R.INSTALL2b360539007893/simecol/src'
make[1]: Entering directory '/tmp/RtmpuxcEJI/R.INSTALL2b360539007893/simecol/src'
make[1]: Leaving directory '/tmp/RtmpuxcEJI/R.INSTALL2b360539007893/simecol/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-simecol/00new/simecol/libs
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘simecol’
    finding HTML links ... done
    CA                                      html  
    addtoenv                                html  
    approxTime                              html  
    as.simObj                               html  
    chemostat                               html  
    conway                                  html  
    diffusion                               html  
    editParms                               html  
    eightneighbours                         html  
    fitOdeModel                             html  
    fromtoby                                html  
    initialize-methods                      html  
    iteration                               html  
    listOrNULL                              html  
    lv                                      html  
    lv3                                     html  
    mixNamedVec                             html  
    modelFit-methods                        html  
    modelFit                                html  
    neighbours                              html  
    observer                                html  
    odeModel                                html  
    p.constrain                             html  
    parms                                   html  
    pcuseries                               html  
    peaks                                   html  
    plot-methods                            html  
    finding level-2 HTML links ... done

    print-methods                           html  
    sEdit                                   html  
    seedfill                                html  
    sim                                     html  
    simecol-package                         html  
    ssqOdeModel                             html  
    upca                                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (simecol)