* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘segclust2d’ ...
** package ‘segclust2d’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/RtmpFzBCtK/R.INSTALL35816e44a558b7/segclust2d/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c SegTraj_DynProg.cpp -o SegTraj_DynProg.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c SegTraj_EM.cpp -o SegTraj_EM.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c SegTraj_Gmixt.cpp -o SegTraj_Gmixt.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o segclust2d.so RcppExports.o SegTraj_DynProg.o SegTraj_EM.o SegTraj_Gmixt.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpFzBCtK/R.INSTALL35816e44a558b7/segclust2d/src'
make[1]: Entering directory '/tmp/RtmpFzBCtK/R.INSTALL35816e44a558b7/segclust2d/src'
make[1]: Leaving directory '/tmp/RtmpFzBCtK/R.INSTALL35816e44a558b7/segclust2d/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-segclust2d/00new/segclust2d/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘segclust2d’
finding HTML links ... done
DynProg html
DynProg_algo_cpp html
EM.algo_simultanee html
EM.algo_simultanee_Cpp html
EM.init_simultanee html
Estep_simultanee html
Gmean_simultanee html
Gmixt_algo_cpp html
Gmixt_simultanee html
Gmixt_simultanee_fullcpp html
Mstep_simultanee html
Mstep_simultanee_cpp html
add_covariates html
angular_speed html
apply_rowSums html
apply_subsampling html
argcheck_Kmax html
argcheck_diag.var html
argcheck_lmin html
argcheck_ncluster html
argcheck_order.var html
argcheck_ordering html
argcheck_scale.variable html
argcheck_seg.var html
argcheck_segclust html
argcheck_segmentation html
argcheck_type_coord html
arma_repmat html
augment html
bisig_plot html
calc_BIC html
calc_dist html
calc_speed html
calc_stat_states html
check_repetition html
choose_kmax html
chooseseg_lavielle html
colsums_sapply html
cumsum_cpp html
find_mu_sd html
hybrid_simultanee html
initialisePhi html
likelihood html
logdens_simultanee html
map_segm html
matrixRupt html
neighborsbis html
plot_segm html
plot_states html
prep_segm html
prep_segm_HMM html
prep_segm_shiftfit html
prepare_HMM html
prepare_shiftfit html
relabel_states html
repmat html
ruptAsMat html
segclust html
segclust2d html
segclust_internal html
segmap_list html
segmentation-class html
segmentation html
simulmode html
simulshift html
spatial_angle html
stat_segm html
stat_segm_HMM html
stat_segm_shiftfit html
subsample_rename html
test_data html
wrap_dynprog_cpp html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (segclust2d)