* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘seeker’ ...
** package ‘seeker’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘seeker’
    finding HTML links ... done
    checkDefaultCommands                    html  
    fastqc                                  html  
    fastqscreen                             html  
    fetch                                   html  
    fetchMetadata                           html  
    getPlatforms                            html  
    getSalmonMetadata                       html  
    getTx2gene                              html  
    installCustomCdfPackages                html  
    installSysDeps                          html  
    multiqc                                 html  
    salmon                                  html  
    seeker                                  html  
    seekerArray                             html  
    trimgalore                              html  
    tximport                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (seeker)