* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘scs’ ...
** package ‘scs’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/RtmprZPxCv/R.INSTALL1f45d641f99458/scs/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
(cp -f scs_mods/rw.c scs_mods/scs.c scs/src && \
cp -f scs_mods/private.c scs/linsys/cpu/direct && \
cp -f scs_mods/scs.mk scs && \
(cd scs && \
(make purge && \
make out/libscsdir.a CC="gcc-13" CFLAGS="-g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic " AR="ar" RANLIB="ranlib")) && \
touch scs.ts)
make[2]: Entering directory '/tmp/RtmprZPxCv/R.INSTALL1f45d641f99458/scs/src/scs'
make[2]: Leaving directory '/tmp/RtmprZPxCv/R.INSTALL1f45d641f99458/scs/src/scs'
make[2]: Entering directory '/tmp/RtmprZPxCv/R.INSTALL1f45d641f99458/scs/src/scs'
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c src/scs.c -o src/scs.o
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o src/util.o src/util.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o src/cones.o src/cones.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o src/exp_cone.o src/exp_cone.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o src/aa.o src/aa.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o src/rw.o src/rw.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o src/linalg.o src/linalg.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o src/ctrlc.o src/ctrlc.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o src/scs_version.o src/scs_version.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o src/normalize.o src/normalize.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/cpu/direct/private.o linsys/cpu/direct/private.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/external/amd/SuiteSparse_config.o linsys/external/amd/SuiteSparse_config.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/external/amd/amd_1.o linsys/external/amd/amd_1.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/external/amd/amd_2.o linsys/external/amd/amd_2.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/external/amd/amd_aat.o linsys/external/amd/amd_aat.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/external/amd/amd_control.o linsys/external/amd/amd_control.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/external/amd/amd_defaults.o linsys/external/amd/amd_defaults.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/external/amd/amd_dump.o linsys/external/amd/amd_dump.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/external/amd/amd_global.o linsys/external/amd/amd_global.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/external/amd/amd_info.o linsys/external/amd/amd_info.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/external/amd/amd_order.o linsys/external/amd/amd_order.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/external/amd/amd_post_tree.o linsys/external/amd/amd_post_tree.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/external/amd/amd_postorder.o linsys/external/amd/amd_postorder.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/external/amd/amd_preprocess.o linsys/external/amd/amd_preprocess.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/external/amd/amd_valid.o linsys/external/amd/amd_valid.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/external/qdldl/qdldl.o linsys/external/qdldl/qdldl.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/scs_matrix.o linsys/scs_matrix.c
gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -Wall -pedantic -funroll-loops -I. -Iinclude -Ilinsys -O3 -fPIC -DCTRLC=1 -DGPU_TRANSPOSE_MAT=1 -DUSE_LAPACK -c -o linsys/csparse.o linsys/csparse.c
mkdir -p out
ar rv out/libscsdir.a src/scs.o src/util.o src/cones.o src/exp_cone.o src/aa.o src/rw.o src/linalg.o src/ctrlc.o src/scs_version.o src/normalize.o linsys/cpu/direct/private.o linsys/external/amd/SuiteSparse_config.o linsys/external/amd/amd_1.o linsys/external/amd/amd_2.o linsys/external/amd/amd_aat.o linsys/external/amd/amd_control.o linsys/external/amd/amd_defaults.o linsys/external/amd/amd_dump.o linsys/external/amd/amd_global.o linsys/external/amd/amd_info.o linsys/external/amd/amd_order.o linsys/external/amd/amd_post_tree.o linsys/external/amd/amd_postorder.o linsys/external/amd/amd_preprocess.o linsys/external/amd/amd_valid.o linsys/external/qdldl/qdldl.o linsys/scs_matrix.o linsys/csparse.o
ar: creating out/libscsdir.a
a - src/scs.o
a - src/util.o
a - src/cones.o
a - src/exp_cone.o
a - src/aa.o
a - src/rw.o
a - src/linalg.o
a - src/ctrlc.o
a - src/scs_version.o
a - src/normalize.o
a - linsys/cpu/direct/private.o
a - linsys/external/amd/SuiteSparse_config.o
a - linsys/external/amd/amd_1.o
a - linsys/external/amd/amd_2.o
a - linsys/external/amd/amd_aat.o
a - linsys/external/amd/amd_control.o
a - linsys/external/amd/amd_defaults.o
a - linsys/external/amd/amd_dump.o
a - linsys/external/amd/amd_global.o
a - linsys/external/amd/amd_info.o
a - linsys/external/amd/amd_order.o
a - linsys/external/amd/amd_post_tree.o
a - linsys/external/amd/amd_postorder.o
a - linsys/external/amd/amd_preprocess.o
a - linsys/external/amd/amd_valid.o
a - linsys/external/qdldl/qdldl.o
a - linsys/scs_matrix.o
a - linsys/csparse.o
ranlib out/libscsdir.a
make[2]: Leaving directory '/tmp/RtmprZPxCv/R.INSTALL1f45d641f99458/scs/src/scs'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I./scs/include -DUSE_LAPACK -DCOPYAMATRIX -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c scsr.c -o scsr.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o scs.so init.o scsr.o -Lscs/out -lscsdir -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmprZPxCv/R.INSTALL1f45d641f99458/scs/src'
make[1]: Entering directory '/tmp/RtmprZPxCv/R.INSTALL1f45d641f99458/scs/src'
make[1]: Leaving directory '/tmp/RtmprZPxCv/R.INSTALL1f45d641f99458/scs/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-scs/00new/scs/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘scs’
finding HTML links ... done
scs html
scs_control html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (scs)