* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘rjags’ ...
** package ‘rjags’ successfully unpacked and MD5 sums checked
** using staged installation
checking for pkg-config... /usr/bin/pkg-config
configure: Setting compile and link flags according to pkg-config
configure: Compile flags are -I/usr/include/JAGS 
configure: Link flags are -ljags 
checking for gcc... gcc-13
checking whether we are using the GNU C compiler... no
checking whether gcc-13 accepts -g... no
checking for gcc-13 option to accept ISO C89... unsupported
checking for jags_version in -ljags... yes
checking version of JAGS library... OK
configure: creating ./config.status
config.status: creating src/Makevars
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating R/unix/zzz.R
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’
using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/Rtmp7NpoBN/R.INSTALL2778d73dc2feeb/rjags/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS    -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS    -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c jags.cc -o jags.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS    -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c parallel.cc -o parallel.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o rjags.so init.o jags.o parallel.o -ljags -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp7NpoBN/R.INSTALL2778d73dc2feeb/rjags/src'
make[1]: Entering directory '/tmp/Rtmp7NpoBN/R.INSTALL2778d73dc2feeb/rjags/src'
make[1]: Leaving directory '/tmp/Rtmp7NpoBN/R.INSTALL2778d73dc2feeb/rjags/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-rjags/00new/rjags/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘rjags’
    finding HTML links ... done
    adapt                                   html  
    coda.samples                            html  
    control                                 html  
    dic.samples                             html  
    diffdic                                 html  
    jags.model                              html  
    jags.module                             html  
    jags.object                             html  
    jags.samples                            html  
    jags.version                            html  
    line                                    html  
    mcarray.object                          html  
    parallel                                html  
    read.jagsdata                           html  
    rjags-deprecated                        html  
    rjags-package                           html  
    update                                  html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rjags)