* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘redist’ ...
** package ‘redist’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
using C++17
make[1]: Entering directory '/tmp/Rtmplcu0jO/R.INSTALL11eaf55f5efb48/redist/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c adj_reduce.cpp -o adj_reduce.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c check_contiguity.cpp -o check_contiguity.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c coarsen.cpp -o coarsen.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c coloring.cpp -o coloring.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c compact_vectorized.cpp -o compact_vectorized.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c constraint_calc_helper.cpp -o constraint_calc_helper.o
constraint_calc_helper.cpp: In function ‘arma::uvec getIn(arma::ivec, arma::ivec)’:
constraint_calc_helper.cpp:107:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
107 | for(i = 0; i < vec1.n_elem; i++){
| ~~^~~~~~~~~~~~~
constraint_calc_helper.cpp:109:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
109 | for(j = 0; j < vec2.n_elem; j++){
| ~~^~~~~~~~~~~~~
constraint_calc_helper.cpp: In function ‘arma::uvec get_in_index(arma::vec, arma::vec)’:
constraint_calc_helper.cpp:125:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
125 | for(i = 0; i < vec1.n_elem; i++){
| ~~^~~~~~~~~~~~~
constraint_calc_helper.cpp:127:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
127 | for(j = 0; j < vec2.n_elem; j++){
| ~~^~~~~~~~~~~~~
constraint_calc_helper.cpp:124:22: warning: variable ‘match’ set but not used [-Wunused-but-set-variable]
124 | int i; int j; bool match; arma::uvec store_in(vec1.n_elem);
| ^~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c contiguity.cpp -o contiguity.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c cores.cpp -o cores.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c crsg.cpp -o crsg.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c distance_helpers.cpp -o distance_helpers.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c kirchhoff.cpp -o kirchhoff.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c labeling.cpp -o labeling.o
In file included from /usr/include/c++/13/vector:67,
from smc_base.h:8,
from labeling.h:2,
from labeling.cpp:1:
In member function ‘std::vector<bool, _Alloc>::reference std::vector<bool, _Alloc>::operator[](size_type) [with _Alloc = std::allocator<bool>]’,
inlined from ‘double log_labelings_IS(const Graph&, int)’ at labeling.cpp:127:26:
/usr/include/c++/13/bits/stl_bvector.h:1084:23: warning: ‘vtx’ may be used uninitialized [-Wmaybe-uninitialized]
1084 | { return begin()[__n]; }
| ~~~~~~~^
labeling.cpp: In function ‘double log_labelings_IS(const Graph&, int)’:
labeling.cpp:117:17: note: ‘vtx’ was declared here
117 | int vtx;
| ^~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c make_swaps_helper.cpp -o make_swaps_helper.o
make_swaps_helper.cpp: In function ‘Rcpp::NumericVector distParity(Rcpp::NumericMatrix, Rcpp::NumericVector)’:
make_swaps_helper.cpp:412:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘long long unsigned int’} [-Wsign-compare]
412 | for(int k = 0; k < assignments.size(); k++){
| ~~^~~~~~~~~~~~~~~~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c map_calc.cpp -o map_calc.o
map_calc.cpp: In function ‘double log_boundary(const Graph&, const arma::subview_col<long long unsigned int>&, int, int)’:
map_calc.cpp:16:26: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare]
16 | if (districts(i) != distr_root) continue; // same side of boundary as root
| ~~~~~~~~~~~~~^~~~~~~~~~~~~
map_calc.cpp:18:33: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare]
18 | if (districts(nbor) != distr_other)
| ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
map_calc.cpp: In function ‘double eval_sq_entropy(const arma::subview_col<long long unsigned int>&, const arma::uvec&, int, const arma::uvec&, int, int, int)’:
map_calc.cpp:38:28: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
38 | if (current[k] != j) continue;
map_calc.cpp:41:30: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare]
41 | if (districts[k] == distr)
| ~~~~~~~~~~~~~^~~~~~~~
map_calc.cpp: In function ‘double eval_inc(const arma::subview_col<long long unsigned int>&, int, const arma::uvec&)’:
map_calc.cpp:114:42: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare]
114 | if (districts[incumbents[i] - 1] == distr)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
map_calc.cpp: In function ‘double eval_polsby(const arma::subview_col<long long unsigned int>&, int, const arma::ivec&, const arma::ivec&, const arma::vec&, const arma::vec&)’:
map_calc.cpp:242:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘long long unsigned int’} [-Wsign-compare]
242 | for (int e = 0; e < idx.size(); e++) {
| ~~^~~~~~~~~~~~
map_calc.cpp:246:41: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare]
246 | if (districts(from(idx(e))) != distr) {
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
map_calc.cpp: In function ‘double eval_fry_hold(const arma::subview_col<long long unsigned int>&, int, const arma::uvec&, arma::mat, double)’:
map_calc.cpp:264:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘long long unsigned int’} [-Wsign-compare]
264 | for (int i = 0; i < idxs.size() - 1; i++) {
| ~~^~~~~~~~~~~~~~~~~
map_calc.cpp:265:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘long long unsigned int’} [-Wsign-compare]
265 | for (int k = i + 1; k < idxs.size(); k++) {
| ~~^~~~~~~~~~~~~
map_calc.cpp: In function ‘double eval_grp_hinge(const arma::subview_col<long long unsigned int>&, int, const arma::vec&, const arma::uvec&, const arma::uvec&)’:
map_calc.cpp:71:43: warning: ‘target’ may be used uninitialized [-Wmaybe-uninitialized]
71 | return std::sqrt(std::max(0.0, target - frac));
| ~~~~~~~^~~~~~
map_calc.cpp:60:12: note: ‘target’ was declared here
60 | double target;
| ^~~~~~
map_calc.cpp: In function ‘double eval_grp_inv_hinge(const arma::subview_col<long long unsigned int>&, int, const arma::vec&, const arma::uvec&, const arma::uvec&)’:
map_calc.cpp:93:41: warning: ‘target’ may be used uninitialized [-Wmaybe-uninitialized]
93 | return std::sqrt(std::max(0.0, frac - target));
| ~~~~~^~~~~~~~
map_calc.cpp:82:12: note: ‘target’ was declared here
82 | double target;
| ^~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c mcmc_gibbs.cpp -o mcmc_gibbs.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c merge_split.cpp -o merge_split.o
In file included from merge_split.h:14,
from merge_split.cpp:9:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h: In function ‘double log_st_distr(const Graph&, const arma::umat&, const arma::uvec&, int, int, int)’:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:25:27: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
25 | if (districts(i, idx) == district && counties(i) == county) {
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:25:54: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
25 | if (districts(i, idx) == district && counties(i) == county) {
| ~~~~~~~~~~~~^~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:34:27: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
34 | if (districts(i, idx) != district || counties(i) != county) continue;
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:34:54: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
34 | if (districts(i, idx) != district || counties(i) != county) continue;
| ~~~~~~~~~~~~^~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:43:32: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
43 | if (districts(nbor, idx) != district || counties(nbor) != county) continue;
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:43:62: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
43 | if (districts(nbor, idx) != district || counties(nbor) != county) continue;
| ~~~~~~~~~~~~~~~^~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h: In function ‘double log_st_contr(const Graph&, const arma::umat&, const arma::uvec&, int, int, int)’:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:70:27: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
70 | if (districts(i, idx) != district) continue;
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:85:27: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
85 | if (districts(i, idx) != district) continue;
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:93:32: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
93 | if (districts(nbor, idx) != district || pos.at(nbor) == cty) continue;
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
merge_split.cpp: In function ‘double split_map_ms(const Graph&, const arma::uvec&, Multigraph&, arma::subview_col<long long unsigned int>, int, int, const arma::uvec&, double, double, double, int)’:
merge_split.cpp:187:26: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare]
187 | if (districts(i) == distr_1 || districts(i) == distr_2) {
| ~~~~~~~~~~~~~^~~~~~~~~~
merge_split.cpp:187:53: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare]
187 | if (districts(i) == distr_1 || districts(i) == distr_2) {
| ~~~~~~~~~~~~~^~~~~~~~~~
merge_split.cpp: In function ‘bool cut_districts_ms(Tree&, int, int, arma::subview_col<long long unsigned int>&, int, int, const arma::uvec&, double, double, double, double)’:
merge_split.cpp:230:26: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare]
230 | if (districts(i) != distr_root || i == root) continue;
| ~~~~~~~~~~~~~^~~~~~~~~~~~~
merge_split.cpp: In function ‘void adapt_ms_parameters(const Graph&, int, int&, double, double, const arma::uvec&, const arma::uvec&, Multigraph&, const arma::uvec&, double)’:
merge_split.cpp:299:25: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
299 | if (plan(j) == distr_1 || plan(j) == distr_2) {
| ~~~~~~~~^~~~~~~~~~
merge_split.cpp:299:47: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
299 | if (plan(j) == distr_1 || plan(j) == distr_2) {
| ~~~~~~~~^~~~~~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c pareto.cpp -o pareto.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c pop_helpers.cpp -o pop_helpers.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c random.cpp -o random.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c renumber.cpp -o renumber.o
In file included from renumber.cpp:4:
hungarian.h: In member function ‘void HungarianAlgorithm::assignmentoptimal(int*, double*, double*, int, int)’:
hungarian.h:169:21: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
169 | if (fabs(distMatrix[row + nOfRows*col]) < DBL_EPSILON)
| ^~
hungarian.h:177:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
177 | for (row = 0; row<nOfRows; row++)
| ^~~
hungarian.h: In member function ‘void HungarianAlgorithm::step2b(int*, double*, bool*, bool*, bool*, bool*, bool*, int, int, int)’:
hungarian.h:254:9: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
254 | for (col = 0; col<nOfColumns; col++)
| ^~~
hungarian.h:258:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
258 | if (nOfCoveredColumns == minDim)
| ^~
hungarian.h: In member function ‘void HungarianAlgorithm::step3(int*, double*, bool*, bool*, bool*, bool*, bool*, int, int, int)’:
hungarian.h:288:29: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
288 | for (starCol = 0; starCol<nOfColumns; starCol++)
| ^~~
hungarian.h:292:33: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
292 | if (starCol == nOfColumns) /* no starred zero found */
| ^~
hungarian.h: In member function ‘void HungarianAlgorithm::step4(int*, double*, bool*, bool*, bool*, bool*, bool*, int, int, int, int, int)’:
hungarian.h:326:9: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
326 | for (starRow = 0; starRow<nOfRows; starRow++)
| ^~~
hungarian.h:330:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
330 | while (starRow<nOfRows)
| ^~~~~
hungarian.h:337:17: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
337 | for (primeCol = 0; primeCol<nOfColumns; primeCol++)
| ^~~
hungarian.h:342:21: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
342 | newStarMatrix[primeRow + nOfRows*primeCol] = true;
| ^~~~~~~~~~~~~
hungarian.h: In member function ‘void HungarianAlgorithm::step5(int*, double*, bool*, bool*, bool*, bool*, bool*, int, int, int)’:
hungarian.h:374:17: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
374 | for (col = 0; col<nOfColumns; col++)
| ^~~
hungarian.h:383:21: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
383 | for (row = 0; row<nOfRows; row++)
| ^~~
hungarian.h:383:21: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
hungarian.h:389:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
389 | for (col = 0; col<nOfColumns; col++)
| ^~~
hungarian.h:389:25: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
hungarian.h:395:29: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
395 | step3(assignment, distMatrix, starMatrix, newStarMatrix, primeMatrix, coveredColumns, coveredRows, nOfRows, nOfColumns, minDim);
| ^~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c rsg.cpp -o rsg.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c scorer_helpers.cpp -o scorer_helpers.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c shatter_search.cpp -o shatter_search.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c smc.cpp -o smc.o
In file included from smc.h:15,
from smc.cpp:8:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h: In function ‘double log_st_distr(const Graph&, const arma::umat&, const arma::uvec&, int, int, int)’:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:25:27: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
25 | if (districts(i, idx) == district && counties(i) == county) {
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:25:54: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
25 | if (districts(i, idx) == district && counties(i) == county) {
| ~~~~~~~~~~~~^~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:34:27: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
34 | if (districts(i, idx) != district || counties(i) != county) continue;
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:34:54: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
34 | if (districts(i, idx) != district || counties(i) != county) continue;
| ~~~~~~~~~~~~^~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:43:32: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
43 | if (districts(nbor, idx) != district || counties(nbor) != county) continue;
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:43:62: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
43 | if (districts(nbor, idx) != district || counties(nbor) != county) continue;
| ~~~~~~~~~~~~~~~^~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h: In function ‘double log_st_contr(const Graph&, const arma::umat&, const arma::uvec&, int, int, int)’:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:70:27: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
70 | if (districts(i, idx) != district) continue;
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:85:27: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
85 | if (districts(i, idx) != district) continue;
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include/kirchhoff_inline.h:93:32: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
93 | if (districts(nbor, idx) != district || pos.at(nbor) == cty) continue;
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
smc.cpp: In function ‘Rcpp::List smc_plans(int, Rcpp::List, const arma::uvec&, const arma::uvec&, int, double, double, double, double, arma::umat, int, int, Rcpp::List, Rcpp::List, int)’:
smc.cpp:40:26: warning: comparison of integer expressions of different signedness: ‘const arma::uword’ {aka ‘const long long unsigned int’} and ‘int’ [-Wsign-compare]
40 | if (districts.n_rows != V || districts.n_cols != N)
| ~~~~~~~~~~~~~~~~~^~~~
smc.cpp:40:51: warning: comparison of integer expressions of different signedness: ‘const arma::uword’ {aka ‘const long long unsigned int’} and ‘int’ [-Wsign-compare]
40 | if (districts.n_rows != V || districts.n_cols != N)
| ~~~~~~~~~~~~~~~~~^~~~
smc.cpp: In function ‘double cut_districts(Tree&, int, int, arma::subview_col<long long unsigned int>&, int, const arma::uvec&, double, double, double, double)’:
smc.cpp:557:30: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare]
557 | if (districts(i - 1) != distr_root || i - 1 == root) continue;
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c smc_base.cpp -o smc_base.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c splits.cpp -o splits.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c sw_mh_alg.cpp -o sw_mh_alg.o
sw_mh_alg.cpp: In function ‘Rcpp::List vector_to_list(arma::uvec)’:
sw_mh_alg.cpp:26:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
26 | for(int i = 0; i < vecname.n_elem; i++) {
| ~~^~~~~~~~~~~~~~~~
sw_mh_alg.cpp: In function ‘arma::uvec get_not_in(arma::uvec, arma::uvec)’:
sw_mh_alg.cpp:35:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
35 | for(i = 0; i < vec1.n_elem; i++) {
| ~~^~~~~~~~~~~~~
sw_mh_alg.cpp: In function ‘Rcpp::List swMH(Rcpp::List, Rcpp::NumericVector, Rcpp::NumericVector, int, Rcpp::List, double, double, Rcpp::NumericVector, Rcpp::NumericVector, int, double, std::string, int, int, int, int, int, int, int, bool)’:
sw_mh_alg.cpp:365:37: warning: ‘start_anneal’ may be used uninitialized [-Wmaybe-uninitialized]
365 | if ((k >= start_anneal) & (k < start_cold)) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
sw_mh_alg.cpp:131:9: note: ‘start_anneal’ was declared here
131 | int start_anneal;
| ^~~~~~~~~~~~
sw_mh_alg.cpp:365:37: warning: ‘start_cold’ may be used uninitialized [-Wmaybe-uninitialized]
365 | if ((k >= start_anneal) & (k < start_cold)) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
sw_mh_alg.cpp:132:9: note: ‘start_cold’ was declared here
132 | int start_cold;
| ^~~~~~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c sw_mh_helper.cpp -o sw_mh_helper.o
sw_mh_helper.cpp: In function ‘Rcpp::NumericVector init_pop(Rcpp::NumericVector, arma::vec)’:
sw_mh_helper.cpp:42:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
42 | for(j = 0; j < cd_i_ind.n_elem; j++){
| ~~^~~~~~~~~~~~~~~~~
sw_mh_helper.cpp: In function ‘int count_valid(Rcpp::List, Rcpp::List, Rcpp::NumericVector)’:
sw_mh_helper.cpp:309:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
309 | for(j = 0; j < find_cds.n_elem; j++){
| ~~^~~~~~~~~~~~~~~~~
sw_mh_helper.cpp: In function ‘Rcpp::List changeBeta(arma::vec, double, double, Rcpp::NumericVector, int)’:
sw_mh_helper.cpp:793:70: warning: ‘wj’ may be used uninitialized [-Wmaybe-uninitialized]
793 | double mhprobGT = (double)exp(-1 * constraint * (propBeta - beta)) * wj / wi * qji / qij;
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
sw_mh_helper.cpp:737:10: note: ‘wj’ was declared here
737 | double wj;
| ^~
sw_mh_helper.cpp:793:61: warning: ‘propBeta’ may be used uninitialized [-Wmaybe-uninitialized]
793 | double mhprobGT = (double)exp(-1 * constraint * (propBeta - beta)) * wj / wi * qji / qij;
| ~~~~~~~~~~^~~~~~~
sw_mh_helper.cpp:738:10: note: ‘propBeta’ was declared here
738 | double propBeta;
| ^~~~~~~~
sw_mh_helper.cpp: In function ‘Rcpp::List make_swaps(Rcpp::List, Rcpp::List, Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::List, Rcpp::CharacterVector, double, double, double, int, double, double, const Graph&)’:
sw_mh_helper.cpp:599:16: warning: ‘curr_cd’ may be used uninitialized [-Wmaybe-uninitialized]
599 | cd_pair(0) = curr_cd;
| ~~~~~~~~~~~^~~~~~~~~
sw_mh_helper.cpp:473:9: note: ‘curr_cd’ was declared here
473 | int curr_cd;
| ^~~~~~~
sw_mh_helper.cpp:600:16: warning: ‘prop_cd’ may be used uninitialized [-Wmaybe-uninitialized]
600 | cd_pair(1) = prop_cd;
| ~~~~~~~~~~~^~~~~~~~~
sw_mh_helper.cpp:474:9: note: ‘prop_cd’ was declared here
474 | int prop_cd;
| ^~~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c tree_op.cpp -o tree_op.o
tree_op.cpp: In function ‘int find_subroot(const Tree&, const std::vector<bool>&)’:
tree_op.cpp:232:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
232 | for (int k = 0; k < nbors->size(); k++) {
| ~~^~~~~~~~~~~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c varinfo.cpp -o varinfo.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppThread/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redistmetrics/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c wilson.cpp -o wilson.o
wilson.cpp: In function ‘int walk_until(const Graph&, int, std::vector<int, std::allocator<int> >&, int, const std::vector<bool>&, const std::vector<bool>&, const arma::uvec&)’:
wilson.cpp:206:52: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare]
206 | if (ignore[proposal] || counties[proposal] != county) {
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o redist.so RcppExports.o adj_reduce.o check_contiguity.o coarsen.o coloring.o compact_vectorized.o constraint_calc_helper.o contiguity.o cores.o crsg.o distance_helpers.o kirchhoff.o labeling.o make_swaps_helper.o map_calc.o mcmc_gibbs.o merge_split.o pareto.o pop_helpers.o random.o renumber.o rsg.o scorer_helpers.o shatter_search.o smc.o smc_base.o splits.o sw_mh_alg.o sw_mh_helper.o tree_op.o varinfo.o wilson.o -latomic -lpthread -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmplcu0jO/R.INSTALL11eaf55f5efb48/redist/src'
make[1]: Entering directory '/tmp/Rtmplcu0jO/R.INSTALL11eaf55f5efb48/redist/src'
make[1]: Leaving directory '/tmp/Rtmplcu0jO/R.INSTALL11eaf55f5efb48/redist/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-redist/00new/redist/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘redist’
finding HTML links ... done
EPSG html
add_reference html
avg_by_prec html
classify_plans html
compare_plans html
constraints html
fl25 html
fl250 html
fl25_adj html
fl25_enum html
fl70 html
get_adj html
get_existing html
get_mh_acceptance_rate html
get_plans_matrix html
get_plans_weights html
get_pop_tol html
get_sampling_info html
get_target html
iowa html
is_contiguous html
is_county_split html
last_plan html
match_numbers html
merge_by html
min_move_parity html
number_by html
pl html
plans_diversity html
plot.redist_classified html
plot.redist_constr html
plot.redist_map html
plot.redist_plans html
prec_assignment html
prec_cooccurrence html
print.redist_classified html
print.redist_constr html
print.redist_map html
print.redist_plans html
pullback html
finding level-2 HTML links ... done
rbind.redist_plans html
redist-package html
redist.adjacency html
redist.calc.frontier.size html
redist.coarsen.adjacency html
redist.combine.mpi html
redist.compactness html
redist.competitiveness html
redist.constraint.helper html
redist.county.id html
redist.county.relabel html
redist.crsg html
redist.diagplot html
redist.dist.pop.overlap html
redist.distances html
redist.district.splits html
redist.enumpart html
redist.find.target html
redist.findparams html
redist.freeze html
redist.group.percent html
redist.identify.cores html
redist.init.enumpart html
redist.ipw html
redist.mcmc.mpi html
redist.metrics html
redist.multisplits html
redist.muni.splits html
redist.parity html
redist.plot.adj html
redist.plot.cores html
redist.plot.distr_qtys html
redist.plot.hist html
redist.plot.majmin html
redist.plot.map html
redist.plot.penalty html
redist.plot.plans html
redist.plot.scatter html
redist.plot.trace html
redist.plot.varinfo html
redist.plot.wted.adj html
redist.prec.pop.overlap html
redist.prep.enumpart html
redist.random.subgraph html
redist.read.enumpart html
redist.reduce.adjacency html
redist.reorder html
redist.rsg html
redist.run.enumpart html
redist.segcalc html
redist.sink.plan html
redist.smc_is_ci html
redist.splits html
redist.subset html
redist.uncoarsen html
redist.wted.adj html
redist_ci html
redist_constr html
redist_flip html
redist_flip_anneal html
redist_map html
redist_mergesplit html
redist_mergesplit_parallel html
redist_plans html
redist_quantile_trunc html
redist_shortburst html
redist_smc html
reexports html
scorer-arith html
scorer-combine html
scorers html
subset_sampled html
summary.redist_plans html
tally_var html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (redist)