* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘randomLCA’ ...
** package ‘randomLCA’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/RtmpfDaQ5G/R.INSTALL303502544e59a8/randomLCA/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bernoulliprob.c -o bernoulliprob.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bernoulliprobrandom.c -o bernoulliprobrandom.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bernoulliprobrandom2.c -o bernoulliprobrandom2.o
bernoulliprobrandom2.c: In function ‘bernoulliprobrandom2’:
bernoulliprobrandom2.c:169:45: warning: ‘rnewmomentdata’ may be used uninitialized [-Wmaybe-uninitialized]
169 | rnewmomentdata[irow]=suml4/suml3;
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
bernoulliprobrandom2.c:13:70: note: ‘rnewmomentdata’ was declared here
13 | *rgh=REAL(gh),*rlambdacoef=REAL(lambdacoef), *rill, *rnewmomentdata,
| ^~~~~~~~~~~~~~
bernoulliprobrandom2.c:80:50: warning: ‘rsum3’ may be used uninitialized [-Wmaybe-uninitialized]
80 | rsum3[i2]=0.0;
| ~~~~~~~~~^~~~
bernoulliprobrandom2.c:14:65: note: ‘rsum3’ was declared here
14 | product, sum2, sum2total, suml3, suml4,suml5, *rsum3, *rsum4, *rsum5, *rsum3total,
| ^~~~~
bernoulliprobrandom2.c:81:50: warning: ‘rsum4’ may be used uninitialized [-Wmaybe-uninitialized]
81 | rsum4[i2]=0.0;
| ~~~~~~~~~^~~~
bernoulliprobrandom2.c:14:73: note: ‘rsum4’ was declared here
14 | product, sum2, sum2total, suml3, suml4,suml5, *rsum3, *rsum4, *rsum5, *rsum3total,
| ^~~~~
bernoulliprobrandom2.c:82:50: warning: ‘rsum5’ may be used uninitialized [-Wmaybe-uninitialized]
82 | rsum5[i2]=0.0;
| ~~~~~~~~~^~~~
bernoulliprobrandom2.c:14:81: note: ‘rsum5’ was declared here
14 | product, sum2, sum2total, suml3, suml4,suml5, *rsum3, *rsum4, *rsum5, *rsum3total,
| ^~~~~
bernoulliprobrandom2.c:14:89: warning: ‘rsum3total’ may be used uninitialized [-Wmaybe-uninitialized]
14 | product, sum2, sum2total, suml3, suml4,suml5, *rsum3, *rsum4, *rsum5, *rsum3total,
| ^~~~~~~~~~
bernoulliprobrandom2.c:15:19: warning: ‘rsum4total’ may be used uninitialized [-Wmaybe-uninitialized]
15 | *rsum4total, *rsum5total, myoutcomex, myoutcomep, mynoutcomep, rtaucoef;
| ^~~~~~~~~~
bernoulliprobrandom2.c:15:32: warning: ‘rsum5total’ may be used uninitialized [-Wmaybe-uninitialized]
15 | *rsum4total, *rsum5total, myoutcomex, myoutcomep, mynoutcomep, rtaucoef;
| ^~~~~~~~~~
bernoulliprobrandom2.c:149:38: warning: ‘suml4’ may be used uninitialized [-Wmaybe-uninitialized]
149 | suml4=suml4+new3p*exp(sum2total+new3w);
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bernoulliprobrandom2.c:14:51: note: ‘suml4’ was declared here
14 | product, sum2, sum2total, suml3, suml4,suml5, *rsum3, *rsum4, *rsum5, *rsum3total,
| ^~~~~
bernoulliprobrandom2.c:150:38: warning: ‘suml5’ may be used uninitialized [-Wmaybe-uninitialized]
150 | suml5=suml5+new3p*new3p*exp(sum2total+new3w);
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bernoulliprobrandom2.c:14:57: note: ‘suml5’ was declared here
14 | product, sum2, sum2total, suml3, suml4,suml5, *rsum3, *rsum4, *rsum5, *rsum3total,
| ^~~~~
bernoulliprobrandom2.c:197:29: warning: ‘newmomentdata’ may be used uninitialized [-Wmaybe-uninitialized]
197 | if (lupdatemoments) SET_VECTOR_ELT(ans, 1, newmomentdata);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bernoulliprobrandom2.c:8:25: note: ‘newmomentdata’ was declared here
8 | SEXP ans, ill, newmomentdata, sum3, sum4, sum5, sum3total, sum4total, sum5total;
| ^~~~~~~~~~~~~
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lcemalgorith.c -o lcemalgorith.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o randomLCA.so bernoulliprob.o bernoulliprobrandom.o bernoulliprobrandom2.o init.o lcemalgorith.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpfDaQ5G/R.INSTALL303502544e59a8/randomLCA/src'
make[1]: Entering directory '/tmp/RtmpfDaQ5G/R.INSTALL303502544e59a8/randomLCA/src'
make[1]: Leaving directory '/tmp/RtmpfDaQ5G/R.INSTALL303502544e59a8/randomLCA/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-randomLCA/00new/randomLCA/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘randomLCA’
finding HTML links ... done
AIC html
AIC3 html
BIC html
calcCond2Prob html
calcCondProb html
calcMargProb html
classProbs html
dentistry html
fitted html
genderrole html
hivtests html
logLik html
maxPostClass html
myocardial html
outcomeProbs html
pap html
plot html
postClassProbs html
print.randomLCA html
randomLCA html
ranef html
refit html
simulate html
summary.randomLCA html
symptoms html
uterinecarcinoma html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (randomLCA)