* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘rags2ridges’ ...
** this is package ‘rags2ridges’ version ‘2.2.8’
** package ‘rags2ridges’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpJumOfy/R.INSTALL1cddf37af22bf6/rags2ridges/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c rags2ridges.cpp -o rags2ridges.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o rags2ridges.so RcppExports.o rags2ridges.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpJumOfy/R.INSTALL1cddf37af22bf6/rags2ridges/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpJumOfy/R.INSTALL1cddf37af22bf6/rags2ridges/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpJumOfy/R.INSTALL1cddf37af22bf6/rags2ridges/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-rags2ridges/00new/rags2ridges/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘rags2ridges’
    finding HTML links ... done
    ADdata                                  html  
    CNplot                                  html  
    Communities                             html  
    DiffGraph                               html  
    GGMblockNullPenalty                     html  
    GGMblockTest                            html  
    GGMmutualInfo                           html  
    GGMnetworkStats                         html  
    GGMnetworkStats.fused                   html  
    GGMpathStats                            html  
    GGMpathStats.fused                      html  
    KLdiv                                   html  
    KLdiv.fused                             html  
    NLL                                     html  
    Ugraph                                  html  
    Union                                   html  
    adjacentMat                             html  
    conditionNumberPlot                     html  
    covML                                   html  
    covMLknown                              html  
    createS                                 html  
    default.penalty                         html  
    default.target                          html  
    default.target.fused                    html  
    dot-armaRidgeP                          html  
    edgeHeat                                html  
    evaluateS                               html  
    evaluateSfit                            html  
    fullMontyS                              html  
    fused.test                              html  
    getKEGGPathway                          html  
    is.Xlist                                html  
    isSymmetricPD                           html  
    kegg.target                             html  
    loss                                    html  
    momentS                                 html  
    optPenalty.LOOCV                        html  
    optPenalty.LOOCVauto                    html  
    optPenalty.aLOOCV                       html  
    optPenalty.fused                        html  
    optPenalty.kCV                          html  
    optPenalty.kCVauto                      html  
    pcor                                    html  
    plot.ptest                              html  
    pooledS                                 html  
    print.optPenaltyFusedGrid               html  
    print.ptest                             html  
    pruneMatrix                             html  
    rags2ridges-package                     html  
    ridgeP                                  html  
    ridgeP.fused                            html  
    ridgePathS                              html  
    ridgeS                                  html  
    rmvnormal                               html  
    sparsify                                html  
    sparsify.fused                          html  
    symm                                    html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rags2ridges)