* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘rTCRBCRr’ ...
** this is package ‘rTCRBCRr’ version ‘0.1.1’
** package ‘rTCRBCRr’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘rTCRBCRr’
    finding HTML links ... done
    all_sample_IGH_chain_all_metrics_wide_format_dataframe
                                            html  
    all_sample_IGH_chain_all_metrics_wide_format_dataframe_list
                                            html  
    all_sample_IGH_chain_individual_metrics_dataframe_list
                                            html  
    all_sample_all_chain_all_metrics_wide_format_dataframe
                                            html  
    all_sample_all_chain_all_metrics_wide_format_dataframe_list
                                            html  
    all_sample_all_chain_individual_metrics_dataframe_list
                                            html  
    annotate_chain_name_and_isotype_name    html  
    calculate_IGH_isotype_proportion        html  
    calculate_repertoire_metrics            html  
    calibrate_proportion_by_clones          html  
    chain_separated_dataframe               html  
    combine_all_sample_repertoire_metrics   html  
    compute_repertoire_metrics_by_chain_name
                                            html  
    convergent_clonotype_merged_dataframe   html  
    format_clonotype_to_immunarch_style     html  
    get_item_name_x_sample_name_for_each_metric
                                            html  
    immunarch_style_dataframe               html  
    merge_convergent_clonotype              html  
    nonproductive_CDR3aa_removed_dataframe
                                            html  
    parse_mixcr                             html  
    parse_trust4                            html  
    rTCRBCRr-package                        html  
    raw_input_clonotype_dataframe           html  
    remove_nonproductive_CDR3aa             html  
    summarize_convergence_function          html  
    summarize_repertoire_metrics            html  
    the-global-variables                    html  
    the_divergent_clonotype_dataframe_list
                                            html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rTCRBCRr)