* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘qtlmt’ ...
** package ‘qtlmt’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmplSO7r5/R.INSTALL7d7116793e0f/qtlmt/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c qtlmt.cc -o qtlmt.o
qtlmt.cc: In function ‘void svd(double**, int, int, double*, double**)’:
qtlmt.cc:695:26: warning: ‘nm’ may be used uninitialized [-Wmaybe-uninitialized]
  695 |                   y=a[j][nm];
      |                          ^~
qtlmt.cc:588:28: note: ‘nm’ was declared here
  588 |    int flag,i,its,j,jj,k,l,nm;
      |                            ^~
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o qtlmt.so qtlmt.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmplSO7r5/R.INSTALL7d7116793e0f/qtlmt/src'
make[1]: Entering directory '/tmp/RtmplSO7r5/R.INSTALL7d7116793e0f/qtlmt/src'
make[1]: Leaving directory '/tmp/RtmplSO7r5/R.INSTALL7d7116793e0f/qtlmt/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-qtlmt/00new/qtlmt/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘qtlmt’
    finding HTML links ... done
    dataSets                                html  
    gv2mpos                                 html  
    mAdd1                                   html  
    mStep                                   html  
    mlogLik                                 html  
    mtcmim                                  html  
    mtcmimStep                              html  
    sureEps                                 html  
    sureEst                                 html  
    sureStep                                html  
    varGroups                               html  
    varSelect                               html  
    varStep                                 html  
    varT2                                   html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (qtlmt)