• using R version 4.5.2 Patched (2026-01-31 r89374)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (Debian 14.3.0-10) 14.3.0     GNU Fortran (Debian 14.3.0-10) 14.3.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8
• checking for file ‘psycho/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘psycho’ version ‘0.6.1’
• package encoding: UTF-8
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• checking whether package ‘psycho’ can be installed ... OK See the install log for details.
• checking package directory ... OK
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• checking Rd files ... [0s/1s] NOTE checkRd: (-1) dprime.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) dprime.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) dprime.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) dprime.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) dprime.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
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• checking installed files from ‘inst/doc’ ... OK
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• checking examples ... [3s/3s] ERROR Running examples in ‘psycho-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: assess > ### Title: Compare a patient's score to a control group > ### Aliases: assess > > ### ** Examples > > result <- assess(patient = 124, mean = 100, sd = 15, n = 100) Error: ! `mutate_()` was deprecated in dplyr 0.7.0 and is now defunct. ℹ Please use `mutate()` instead. ℹ See vignette('programming') for more help Backtrace:     ▆  1. ├─psycho::assess(patient = 124, mean = 100, sd = 15, n = 100)  2. │ └─psycho::crawford.test(...)  3. │ └─... %>% ggplot(aes_string(x = "x", ymin = 0, ymax = "y"))  4. ├─ggplot2::ggplot(., aes_string(x = "x", ymin = 0, ymax = "y"))  5. └─dplyr::mutate_(., x = "scales::rescale(x, from=c(0, 1), to = c(sample_mean, sample_mean+sample_sd))")  6. └─dplyr:::lazy_defunct("mutate")  7. └─lifecycle::deprecate_stop(...)  8. └─lifecycle:::deprecate_stop0(msg)  9. └─rlang::cnd_signal(...) Execution halted
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [5s/6s] ERROR   Running ‘testthat.R’ [4s/6s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(psycho)   >   > test_check("psycho")   Saving _problems/test-assess-10.R   Saving _problems/test-assess-45.R   The Crawford-Howell (1998) t-test suggests no dissociation between test X and test Y (t(5) = 2.10, p p = 0.090). The patient's score on test X is not significantly altered compared to its score on test Y.      .0.00%   .33.00%   .67.00%   .100.00%   1   [ FAIL 2 | WARN 0 | SKIP 0 | PASS 17 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-assess.R:7:3'): assess ─────────────────────────────────────────   <lifecycle_error_deprecated/defunctError/rlang_error/error/condition>   Error: `mutate_()` was deprecated in dplyr 0.7.0 and is now defunct.   ℹ Please use `mutate()` instead.   ℹ See vignette('programming') for more help   Backtrace:       ▆    1. ├─psycho::assess(...) at test-assess.R:7:3    2. │ └─psycho::crawford.test(...)    3. │ └─... %>% ggplot(aes_string(x = "x", ymin = 0, ymax = "y"))    4. ├─ggplot2::ggplot(., aes_string(x = "x", ymin = 0, ymax = "y"))    5. └─dplyr::mutate_(., x = "scales::rescale(x, from=c(0, 1), to = c(sample_mean, sample_mean+sample_sd))")    6. └─dplyr:::lazy_defunct("mutate")    7. └─lifecycle::deprecate_stop(...)    8. └─lifecycle:::deprecate_stop0(msg)    9. └─rlang::cnd_signal(...)   ── Error ('test-assess.R:42:3'): crawford.test ─────────────────────────────────   <lifecycle_error_deprecated/defunctError/rlang_error/error/condition>   Error: `mutate_()` was deprecated in dplyr 0.7.0 and is now defunct.   ℹ Please use `mutate()` instead.   ℹ See vignette('programming') for more help   Backtrace:       ▆    1. ├─psycho::crawford.test(...) at test-assess.R:42:3    2. │ └─... %>% ggplot(aes_string(x = "x", ymin = 0, ymax = "y"))    3. ├─ggplot2::ggplot(., aes_string(x = "x", ymin = 0, ymax = "y"))    4. └─dplyr::mutate_(., x = "scales::rescale(x, from=c(0, 1), to = c(sample_mean, sample_mean+sample_sd))")    5. └─dplyr:::lazy_defunct("mutate")    6. └─lifecycle::deprecate_stop(...)    7. └─lifecycle:::deprecate_stop0(msg)    8. └─rlang::cnd_signal(...)      [ FAIL 2 | WARN 0 | SKIP 0 | PASS 17 ]   Error:   ! Test failures.   Execution halted
• checking for unstated dependencies in vignettes ... OK
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• checking PDF version of manual ... [5s/6s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 2 ERRORs, 1 NOTE