* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘prider’ ...
** this is package ‘prider’ version ‘1.0.6’
** package ‘prider’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-16 (Debian 16.2.0-1) 16.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpfF1PpC/R.INSTALL1123620827232/prider/src'
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c chunker.cpp -o chunker.o
chunker.cpp: In function ‘Rcpp::DataFrame chunker(Rcpp::DataFrame, int)’:
chunker.cpp:51:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   51 |   for (int inc1 = 0; inc1 < seqs.size(); ++inc1) {
      |                      ~~~~~^~~~~~~~~~~~~
chunker.cpp:54:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   54 |     for (int inc2 = 0 ; inc2 < seq_acc.size() ; ++inc2) {
      |                         ~~~~~^~~~~~~~~~~~~~~~
g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o prider.so RcppExports.o chunker.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpfF1PpC/R.INSTALL1123620827232/prider/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpfF1PpC/R.INSTALL1123620827232/prider/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpfF1PpC/R.INSTALL1123620827232/prider/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-prider/00new/prider/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘prider’
    finding HTML links ... done
    chunker                                 html  
    new_prider                              html  
    new_primers                             html  
    new_sequences                           html  
    prepare_primer_df                       html  
    prider                                  html  
    primers                                 html  
    sequences                               html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (prider)