Install log for 'popPCR'

* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘popPCR’ ...
** package ‘popPCR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmpbqkaCA/R.INSTALL40126a83c682/popPCR/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c EMMIXskew_init.c -o EMMIXskew_init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c density.c -o density.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c density2.f -o density2.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c distance.c -o distance.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c estep.c -o estep.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c mixda.f -o mixda.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c mixem.c -o mixem.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c mixinit.c -o mixinit.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c mixmsn.f -o mixmsn.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c mixmsnda.f -o mixmsnda.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c mixmst.f -o mixmst.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c mixmstda.f -o mixmstda.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c mixmvnda.f -o mixmvnda.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c mixmvtda.f -o mixmvtda.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c module.c -o module.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c mstep.c -o mstep.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c predmixdamsn.f -o predmixdamsn.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c predmixdamst.f -o predmixdamst.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c scaestep.c -o scaestep.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c scamstep.f -o scamstep.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c zeroin.c -o zeroin.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o popPCR.so EMMIXskew_init.o density.o density2.o distance.o estep.o mixda.o mixem.o mixinit.o mixmsn.o mixmsnda.o mixmst.o mixmstda.o mixmvnda.o mixmvtda.o module.o mstep.o predmixdamsn.o predmixdamst.o scaestep.o scamstep.o zeroin.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpbqkaCA/R.INSTALL40126a83c682/popPCR/src'
make[1]: Entering directory '/tmp/RtmpbqkaCA/R.INSTALL40126a83c682/popPCR/src'
make[1]: Leaving directory '/tmp/RtmpbqkaCA/R.INSTALL40126a83c682/popPCR/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-popPCR/00new/popPCR/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘popPCR’
    finding HTML links ... done
    calculateConc                           html  
    popPCR                                  html  
    printSummaryConc                        html  
    printSummaryFit                         html  
    x_multiPop                              html  
    x_onePop                                html  
    x_twoPop                                html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (popPCR)