* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘plgp’ ...
** package ‘plgp’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/Rtmp6RQxiO/R.INSTALL7953014baff51/plgp/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DNDEBUG -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c covar.c -o covar.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DNDEBUG -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c entropy.c -o entropy.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DNDEBUG -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c ieci.c -o ieci.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DNDEBUG -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c linalg.c -o linalg.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DNDEBUG -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c matrix.c -o matrix.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DNDEBUG -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c plgp_init.c -o plgp_init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DNDEBUG -DRPRINT  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c rhelp.c -o rhelp.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o plgp.so covar.o entropy.o ieci.o linalg.o matrix.o plgp_init.o rhelp.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp6RQxiO/R.INSTALL7953014baff51/plgp/src'
make[1]: Entering directory '/tmp/Rtmp6RQxiO/R.INSTALL7953014baff51/plgp/src'
make[1]: Leaving directory '/tmp/Rtmp6RQxiO/R.INSTALL7953014baff51/plgp/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-plgp/00new/plgp/libs
** R
** demo
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘plgp’
    finding HTML links ... done
    PL                                      html  
    addpall.GP                              html  
    data.GP                                 html  
    draw.GP                                 html  
    exp2d.C                                 html  
    init.GP                                 html  
    lpredprob.GP                            html  
    papply                                  html  
    params.GP                               html  
    plgp-internal                           html  
    plgp-package                            html  
    pred.GP                                 html  
    prior.GP                                html  
    propagate.GP                            html  
    rectscale                               html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (plgp)