* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘physiology’ ... ** package ‘physiology’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’ using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’ make[1]: Entering directory '/tmp/Rtmpmqoit5/R.INSTALL248d4b306eda4a/physiology/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c atm-pressure.cpp -o atm-pressure.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c registration.c -o registration.o g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o physiology.so RcppExports.o atm-pressure.o registration.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/tmp/Rtmpmqoit5/R.INSTALL248d4b306eda4a/physiology/src' make[1]: Entering directory '/tmp/Rtmpmqoit5/R.INSTALL248d4b306eda4a/physiology/src' make[1]: Leaving directory '/tmp/Rtmpmqoit5/R.INSTALL248d4b306eda4a/physiology/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-physiology/00new/physiology/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘physiology’ finding HTML links ... done Pa_to_torr html adj_weight_adult html age_from_dates html age_m html alveolar_PAO2_mmHg html bloodvol html bmi html bsa html creatinine_mgdl_to_uM html deadspace_equipment_ml html deadspace_things_ml html deadspace_total html egfr html ett_size_by_age html ett_vol_ml html french_to_diameter_mm html henderson_hasselbalch html ideal_weight html ideal_weight_Traub html is_adult html physiology-package html pres_atm_kPa html svp_sea_level html temp_c_to_k html valid_height html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (physiology)