* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘phenology’ ...
** this is package ‘phenology’ version ‘10.3’
** package ‘phenology’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘phenology’
    finding HTML links ... done
    AutoFitPhenology                        html  
    BE_to_LBLE                              html  
    Bayesian.remigration                    html  
    CI.RMU                                  html  
    ECFOCF_f                                html  
    ECFOCF_full                             html  
    ExponentialRegression                   html  
    Gratiot                                 html  
    IPFit                                   html  
    IPModel                                 html  
    IPPredict                               html  
    LBLE_to_BE                              html  
    LBLE_to_L                               html  
    L_to_LBLE                               html  
    LnRI_norm                               html  
    MarineTurtles_2002                      html  
    MinBMinE_to_Min                         html  
    Parameter_Global_Year                   html  
    RI                                      html  
    RI2BP                                   html  
    TableECFOCF                             html  
    Tagloss_L                               html  
    Tagloss_LengthObs                       html  
    Tagloss_cumul                           html  
    Tagloss_daymax                          html  
    Tagloss_fit                             html  
    Tagloss_format                          html  
    Tagloss_mcmc                            html  
    Tagloss_mcmc_p                          html  
    Tagloss_model                           html  
    Tagloss_simulate                        html  
    adapt_parameters                        html  
    add_SE                                  html  
    add_phenology                           html  
    extract_result                          html  
    fitCF                                   html  
    fitCF_MHmcmc                            html  
    fitCF_MHmcmc_p                          html  
    fitRMU                                  html  
    fitRMU_MHmcmc                           html  
    fitRMU_MHmcmc_p                         html  
    fit_phenology                           html  
    fixed.parameters0                       html  
    generateCF                              html  
    likelihood_phenology                    html  
    lnLCF                                   html  
    logLik.ECFOCF                           html  
    logLik.Tagloss                          html  
    logLik.fitRMU                           html  
    logLik.phenology                        html  
    map_Gratiot                             html  
    map_phenology                           html  
    o_4p_p1p2                               html  
    outLR                                   html  
    par_init                                html  
    phenology-package                       html  
    phenology                               html  
    phenology2fitRMU                        html  
    phenology_MHmcmc                        html  
    phenology_MHmcmc_p                      html  
    plot.ECFOCF                             html  
    plot.IP                                 html  
    plot.Remigration                        html  
    plot.TableECFOCF                        html  
    plot.Tagloss                            html  
    plot.TaglossData                        html  
    plot.fitRMU                             html  
    plot.phenology                          html  
    plot.phenologymap                       html  
    plot_delta                              html  
    plot_phi                                html  
    print.phenology                         html  
    print.phenologymap                      html  
    print.phenologyout                      html  
    remove_site                             html  
    result_Gratiot                          html  
    result_Gratiot1                         html  
    result_Gratiot2                         html  
    result_Gratiot_Flat                     html  
    shift_sinusoid                          html  
    summary.IP                              html  
    summary.phenology                       html  
    summary.phenologymap                    html  
    summary.phenologyout                    html  
    toggle_Min_PMin                         html  
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (phenology)