* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘pep725’ ...
** this is package ‘pep725’ version ‘1.0.0’
** package ‘pep725’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘pep725’
    finding HTML links ... done
    add_country                             html  
    add_daylength                           html  
    as.pep                                  html  
    bbch_description                        html  
    calc_daylength                          html  
    calc_max_daylength                      html  
    calc_thermal_sum                        html  
    calc_thermal_units                      html  
    check_connectivity_internal             html  
    fit_lad                                 html  
    fit_mixed                               html  
    fit_ols                                 html  
    get_phenology_doys                      html  
    is.pep                                  html  
    kendall_tau                             html  
    new_pep                                 html  
    pep-class                               html  
    pep725_demo                             html  
    pep_cache_clear                         html  
    pep_cache_info                          html  
    pep_check_connectivity                  html  
    pep_check_phases                        html  
    pep_check_phases_multi                  html  
    pep_completeness                        html  
    pep_coverage                            html  
    pep_download                            html  
    pep_flag_outliers                       html  
    pep_import                              html  
    pep_plot_outliers                       html  
    pep_quality                             html  
    pep_second_events                       html  
    pep_seed                                html  
    pep_simulate                            html  
    pheno_anomaly                           html  
    pheno_combine                           html  
    pheno_gradient                          html  
    pheno_leaflet                           html  
    pheno_map                               html  
    pheno_normals                           html  
    pheno_plot                              html  
    pheno_plot_hh                           html  
    pheno_plot_timeseries                   html  
    pheno_pls                               html  
    pheno_regional                          html  
    pheno_regional_hh                       html  
    pheno_synchrony                         html  
    pheno_trend_turning                     html  
    plot.pep                                html  
    plot.pep_completeness                   html  
    plot.pep_coverage                       html  
    plot.pep_outliers                       html  
    plot.pep_quality                        html  
    plot.pheno_anomaly                      html  
    plot.pheno_combined                     html  
    plot.pheno_gradient                     html  
    plot.pheno_normals                      html  
    plot.pheno_pls                          html  
    plot.pheno_synchrony                    html  
    plot.pheno_turning                      html  
    plot.second_events                      html  
    plot_phenology_trends                   html  
    print.pep                               html  
    print.pep_completeness                  html  
    print.pep_coverage                      html  
    print.pep_outliers                      html  
    print.pep_quality                       html  
    print.phase_check                       html  
    print.phase_check_multi                 html  
    print.pheno_anomaly                     html  
    print.pheno_combined                    html  
    print.pheno_gradient                    html  
    print.pheno_normals                     html  
    print.pheno_pls                         html  
    print.pheno_synchrony                   html  
    print.pheno_turning                     html  
    print.second_events                     html  
    select_phase                            html  
    sequential_mk                           html  
    sub-.pep                                html  
    subspecies_report                       html  
    summarize_subspecies_availability       html  
    summary.pep                             html  
    summary.pep_completeness                html  
    summary.pep_outliers                    html  
    summary.pep_quality                     html  
    summary.pheno_anomaly                   html  
    summary.pheno_normals                   html  
    summary.pheno_pls                       html  
    summary.pheno_synchrony                 html  
    summary.second_events                   html  
    validate_pep                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (pep725)